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微生物次级代谢产物:加速从发现到应用进程的进展

Microbial secondary metabolites: advancements to accelerate discovery towards application.

作者信息

Dinglasan Jaime Lorenzo N, Otani Hiroshi, Doering Drew T, Udwary Daniel, Mouncey Nigel J

机构信息

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.

出版信息

Nat Rev Microbiol. 2025 Jun;23(6):338-354. doi: 10.1038/s41579-024-01141-y. Epub 2025 Jan 17.

Abstract

Microbial secondary metabolites not only have key roles in microbial processes and relationships but are also valued in various sectors of today's economy, especially in human health and agriculture. The advent of genome sequencing has revealed a previously untapped reservoir of biosynthetic capacity for secondary metabolites indicating that there are new biochemistries, roles and applications of these molecules to be discovered. New predictive tools for biosynthetic gene clusters (BGCs) and their associated pathways have provided insights into this new diversity. Advanced molecular and synthetic biology tools and workflows including cell-based and cell-free expression facilitate the study of previously uncharacterized BGCs, accelerating the discovery of new metabolites and broadening our understanding of biosynthetic enzymology and the regulation of BGCs. These are complemented by new developments in metabolite detection and identification technologies, all of which are important for unlocking new chemistries that are encoded by BGCs. This renaissance of secondary metabolite research and development is catalysing toolbox development to power the bioeconomy.

摘要

微生物次级代谢产物不仅在微生物过程和关系中发挥关键作用,而且在当今经济的各个领域都具有重要价值,特别是在人类健康和农业方面。基因组测序的出现揭示了以前未开发的次级代谢产物生物合成能力库,这表明这些分子还有新的生物化学性质、作用和应用有待发现。用于生物合成基因簇(BGC)及其相关途径的新预测工具为这种新的多样性提供了见解。先进的分子和合成生物学工具及工作流程,包括基于细胞和无细胞表达,有助于研究以前未表征的BGC,加速新代谢产物的发现,并拓宽我们对生物合成酶学和BGC调控的理解。代谢产物检测和鉴定技术的新进展对这些起到了补充作用,所有这些对于解锁由BGC编码的新化学物质都很重要。次级代谢产物研发的复兴正在催化工具箱的开发,以推动生物经济发展。

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