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基因组和分子特征可区分青年期癌症与晚发性癌症。

Genomic and molecular features distinguish young adult cancer from later-onset cancer.

机构信息

Department of Genetics and Genomic Sciences, Center for Transformative Disease Modeling, Tisch Cancer Institute, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

出版信息

Cell Rep. 2021 Nov 16;37(7):110005. doi: 10.1016/j.celrep.2021.110005.

Abstract

Young adult cancer has increased in incidence worldwide, but its molecular etiologies remain unclear. We systematically characterize genomic profiles of young adult tumors with ages of onset ≤50 years and compare them to later-onset tumors using over 6,000 cases across 14 cancer types. While young adult tumors generally show lower mutation burdens and comparable copy-number variation rates compared to later-onset cases, they are enriched for multiple driver mutations and copy-number alterations in subtype-specific contexts. Characterization of tumor immune microenvironments reveals pan-cancer patterns of elevated TGF-β response/dendritic cells and lower IFN-γ response/macrophages relative to later-onset tumors, corresponding to age-related responses to immunotherapy in several cancer types. Finally, we identify prevalent clinically actionable events that disproportionally affect young adult or later-onset cases. The resulting catalog of age-related molecular drivers can guide precision diagnostics and treatments for young adult cancer.

摘要

全球范围内,青年癌症的发病率有所增加,但其分子病因仍不清楚。我们系统地描述了发病年龄≤50 岁的青年肿瘤的基因组特征,并将其与 14 种癌症类型的 6000 多个病例中的发病年龄较大的肿瘤进行了比较。虽然与发病年龄较大的病例相比,青年肿瘤的突变负担通常较低,且拷贝数变异率相当,但它们在亚组特异性背景中富集了多种驱动突变和拷贝数改变。肿瘤免疫微环境的特征分析揭示了与发病年龄较大的肿瘤相比,泛癌中 TGF-β 反应/树突细胞升高和 IFN-γ 反应/巨噬细胞减少的模式,这与几种癌症类型中与年龄相关的免疫治疗反应相对应。最后,我们确定了普遍存在的临床可操作事件,这些事件不成比例地影响青年或发病年龄较大的病例。由此产生的与年龄相关的分子驱动因素目录可以为青年癌症的精准诊断和治疗提供指导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/252b/8631509/8737939f67bc/nihms-1757908-f0001.jpg

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