Suppr超能文献

针对……和……的五种随机细胞周期与细胞大小控制模型的定量检验

Quantitative Examination of Five Stochastic Cell-Cycle and Cell-Size Control Models for and .

作者信息

Le Treut Guillaume, Si Fangwei, Li Dongyang, Jun Suckjoon

机构信息

Theory Group, Chan Zuckerberg Biohub, San Francisco, CA, United States.

Department of Physics, University of California, San Diego, San Diego, CA, United States.

出版信息

Front Microbiol. 2021 Oct 26;12:721899. doi: 10.3389/fmicb.2021.721899. eCollection 2021.

Abstract

We examine five quantitative models of the cell-cycle and cell-size control in and that have been proposed over the last decade to explain single-cell experimental data generated with high-throughput methods. After presenting the statistical properties of these models, we test their predictions against experimental data. Based on simple calculations of the defining correlations in each model, we first dismiss the stochastic Helmstetter-Cooper model and the Initiation Adder model, and show that both the Replication Double Adder (RDA) and the Independent Double Adder (IDA) model are more consistent with the data than the other models. We then apply a recently proposed statistical analysis method and obtain that the IDA model is the most likely model of the cell cycle. By showing that the RDA model is fundamentally inconsistent with size convergence by the adder principle, we conclude that the IDA model is most consistent with the data and the biology of bacterial cell-cycle and cell-size control. Mechanistically, the Independent Adder Model is equivalent to two biological principles: (i) balanced biosynthesis of the cell-cycle proteins, and (ii) their accumulation to a respective threshold number to trigger initiation and division.

摘要

我们研究了过去十年间提出的五个关于细菌细胞周期和细胞大小控制的定量模型,这些模型用于解释通过高通量方法生成的单细胞实验数据。在介绍了这些模型的统计特性之后,我们根据实验数据对它们的预测进行了检验。基于对每个模型中定义相关性的简单计算,我们首先排除了随机赫尔姆施泰特 - 库珀模型和起始加法器模型,并表明复制双加法器(RDA)模型和独立双加法器(IDA)模型比其他模型更符合数据。然后,我们应用最近提出的一种统计分析方法,得出IDA模型是最有可能的细胞周期模型。通过表明RDA模型在加法器原理下与大小收敛从根本上不一致,我们得出结论,IDA模型与细菌细胞周期和细胞大小控制的数据及生物学最为一致。从机制上讲,独立加法器模型等同于两个生物学原理:(i)细胞周期蛋白的平衡生物合成,以及(ii)它们积累到各自的阈值数量以触发起始和分裂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f5d/8594374/0a04c460276d/fmicb-12-721899-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验