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无创性胶带剥离结合高分辨率 RNA 分析可有效捕获非皮损银屑病皮肤的炎症前状态。

Noninvasive Tape-Stripping with High-Resolution RNA Profiling Effectively Captures a Preinflammatory State in Nonlesional Psoriatic Skin.

机构信息

Department of Dermatology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, USA; Department of Computational Medicine & Bioinformatics, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, USA; Department of Biostatistics, School of Public Health, University of Michigan, Ann Arbor, Michigan, USA; Center for Statistical Genetics, School of Public Health, University of Michigan, Ann Arbor, Michigan, USA.

Department of Dermatology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, USA.

出版信息

J Invest Dermatol. 2022 Jun;142(6):1587-1596.e2. doi: 10.1016/j.jid.2021.09.038. Epub 2021 Nov 19.

Abstract

Tape stripping is a minimally invasive, nonscarring method that can be utilized to assess gene expression in the skin but is infrequently used given technical constraints. By comparing different tape stripping technologies and full-thickness skin biopsy results of lesional and nonlesional psoriatic skin from the same patients, we demonstrate that tape stripping with optimized high-resolution transcriptomic profiling can be used to effectively assess and characterize inflammatory responses in the skin. Upon comparison with single-cell RNA-sequencing data from psoriatic full-thickness skin biopsies, we illustrate that tape-stripping efficiently captures the transcriptome of the upper layers of the epidermis with sufficient resolution to assess the molecular components of the feed-forward immune amplification pathway in psoriasis. Notably, nonlesional psoriatic skin sampled by tape stripping demonstrates activated, proinflammatory changes when compared to healthy control skin, suggesting a prepsoriatic state, which is not captured on full-thickness skin biopsy transcriptome profiling. This work illustrates an approach to assess inflammatory response in the epidermis by combining noninvasive sampling with high throughput RNA-sequencing, providing a foundation for biomarker discoveries and mechanism of action studies for inflammatory skin conditions.

摘要

胶带剥离是一种微创、无疤痕的方法,可用于评估皮肤中的基因表达,但由于技术限制,其应用并不广泛。通过比较不同的胶带剥离技术和来自同一患者的病变和非病变银屑病皮肤的全层皮肤活检结果,我们证明了优化的高分辨率转录组分析的胶带剥离可用于有效评估和描述皮肤中的炎症反应。与银屑病全层皮肤活检的单细胞 RNA 测序数据进行比较后,我们说明胶带剥离可以有效地捕获表皮上层的转录组,具有足够的分辨率来评估银屑病中正向免疫放大途径的分子成分。值得注意的是,与健康对照皮肤相比,通过胶带剥离采样的非病变银屑病皮肤显示出激活的促炎变化,提示存在银屑病前状态,这在全层皮肤活检转录组分析中无法捕捉到。这项工作说明了通过将非侵入性采样与高通量 RNA 测序相结合来评估表皮炎症反应的方法,为炎症性皮肤疾病的生物标志物发现和作用机制研究提供了基础。

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