Affiliated Hospital of Medical School, Ningbo University, Ningbo 315020, China.
Faculty of Electrical Engineering and Computer Science, Ningbo University, Ningbo 315211, China.
Math Biosci Eng. 2021 Sep 16;18(6):8084-8095. doi: 10.3934/mbe.2021401.
The purpose of this study was to assess the overall survival of patients with HGG using a nomogram which combines the optimized radiomics with deep signatures extracted from 3D Magnetic Resonance Images (MRI) as well as clinical predictors. One training cohort of 168 HGG patients and one validation cohort of 42 HGG patients were enrolled in this study. From each patient's 3D MRI, 1284 radiomics features were extracted, and 8192 deep features were extracted via transfer learning. By using Least Absolute Shrinkage and Selection Operator (LASSO) regression to select features, the radiomics signatures and deep signatures were generated. The radiomics and deep features were then analyzed synthetically to generate a combined signature. Finally, the nomogram was developed by integrating the combined signature and clinical predictors. The radiomics and deep signatures were significantly associated with HGG patients' survival time. The signature derived from the synthesized radiomics and deep features showed a better prognostic performance than those from radiomics or deep features alone. The nomogram we developed takes the advantages of both radiomics and deep signatures, and also integrates the predictive ability of clinical indicators. The calibration curve shows our predicted survival time by the nomogram was very close to the actual time.
本研究旨在评估使用列线图结合从三维磁共振成像(MRI)中提取的经过优化的放射组学和深度学习特征以及临床预测因子的 HGG 患者的总生存期。本研究纳入了 168 名 HGG 患者的训练队列和 42 名 HGG 患者的验证队列。从每位患者的 3D MRI 中提取了 1284 个放射组学特征,并通过迁移学习提取了 8192 个深度学习特征。通过使用最小绝对收缩和选择算子(LASSO)回归选择特征,生成放射组学特征和深度学习特征。然后综合分析放射组学和深度学习特征以生成组合特征。最后,通过整合组合特征和临床预测因子来开发列线图。放射组学和深度学习特征与 HGG 患者的生存时间显著相关。源自综合放射组学和深度学习特征的特征比单独的放射组学或深度学习特征具有更好的预后性能。我们开发的列线图结合了放射组学和深度学习特征的优势,并且还整合了临床指标的预测能力。校准曲线表明,我们通过列线图预测的生存时间与实际时间非常接近。