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低温电子显微镜结构揭示细胞色素 c 氧化酶的替代催化反应循环。

Cryo-EM structures of intermediates suggest an alternative catalytic reaction cycle for cytochrome c oxidase.

机构信息

Department of Molecular Membrane Biology, Max Planck Institute of Biophysics, D-60438, Frankfurt/Main, Germany.

Institute of Pharmaceutical Chemistry, Phillips University Marburg, D-35032, Marburg, Germany.

出版信息

Nat Commun. 2021 Nov 25;12(1):6903. doi: 10.1038/s41467-021-27174-y.

DOI:10.1038/s41467-021-27174-y
PMID:34824221
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8617209/
Abstract

Cytochrome c oxidases are among the most important and fundamental enzymes of life. Integrated into membranes they use four electrons from cytochrome c molecules to reduce molecular oxygen (dioxygen) to water. Their catalytic cycle has been considered to start with the oxidized form. Subsequent electron transfers lead to the E-state, the R-state (which binds oxygen), the P-state (with an already split dioxygen bond), the F-state and the O-state again. Here, we determined structures of up to 1.9 Å resolution of these intermediates by single particle cryo-EM. Our results suggest that in the O-state the active site contains a peroxide dianion and in the P-state possibly an intact dioxygen molecule, the F-state may contain a superoxide anion. Thus, the enzyme's catalytic cycle may have to be turned by 180 degrees.

摘要

细胞色素 c 氧化酶是生命中最重要和最基本的酶之一。它们整合到膜中,利用细胞色素 c 分子中的四个电子将分子氧(氧气)还原为水。它们的催化循环被认为从氧化形式开始。随后的电子转移导致 E 态、R 态(与氧结合)、P 态(已经分裂的氧键)、F 态和 O 态再次出现。在这里,我们通过单颗粒 cryo-EM 确定了这些中间体高达 1.9Å分辨率的结构。我们的结果表明,在 O 态下,活性位点含有过氧二阴离子,在 P 态下可能含有完整的氧气分子,F 态可能含有超氧阴离子。因此,酶的催化循环可能需要旋转 180 度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/ff870ba01f26/41467_2021_27174_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/3390ef1bc429/41467_2021_27174_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/2aa3bae52f25/41467_2021_27174_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/59745aecfaf8/41467_2021_27174_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/f02800a1c3a2/41467_2021_27174_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/1dc36f2f192e/41467_2021_27174_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/c1372f126764/41467_2021_27174_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/1fa862e6a5f4/41467_2021_27174_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/ccb1fef3f6c8/41467_2021_27174_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/ff870ba01f26/41467_2021_27174_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/3390ef1bc429/41467_2021_27174_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/2aa3bae52f25/41467_2021_27174_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/59745aecfaf8/41467_2021_27174_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/f02800a1c3a2/41467_2021_27174_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/1dc36f2f192e/41467_2021_27174_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/c1372f126764/41467_2021_27174_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/1fa862e6a5f4/41467_2021_27174_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/ccb1fef3f6c8/41467_2021_27174_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4a3/8617209/ff870ba01f26/41467_2021_27174_Fig9_HTML.jpg

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