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非同源末端连接(NHEJ)突变分生孢子的介导转化:一种使用可选择营养标记进行靶向基因重组的有效工具。

-Mediated Transformation of NHEJ Mutant Conidia: An Efficient Tool for Targeted Gene Recombination Using Selectable Nutritional Markers.

作者信息

Casado-Del Castillo Virginia, MacCabe Andrew P, Orejas Margarita

机构信息

Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), c/Catedrático Agustín Escardino Benlloch 7, 46980 Paterna, Valencia, Spain.

出版信息

J Fungi (Basel). 2021 Nov 12;7(11):961. doi: 10.3390/jof7110961.

DOI:10.3390/jof7110961
PMID:34829246
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8623315/
Abstract

Protoplast transformation for the introduction of recombinant DNA into is technically demanding and dependant on the availability and batch variability of commercial enzyme preparations. Given the success of -mediated transformation (ATMT) in diverse pathogenic fungi, we have adapted this method to facilitate transformation of . Using suitably engineered binary vectors, gene-targeted ATMT of non-homologous end-joining (NHEJ) mutant conidia has been carried out for the first time by complementation of a nutritional requirement (uridine/uracil auxotrophy). Site-specific integration in the Δ host genome occurred at high efficiency. Unlike other transformation techniques, however, cross-feeding of certain nutritional requirements from the bacterium to the fungus was found to occur, thus limiting the choice of auxotrophies available for ATMT. In complementation tests and also for comparative purposes, integration of recombinant cassettes at a specific locus could provide a means to reduce the influence of position effects (chromatin structure) on transgene expression. In this regard, targeted disruption of the locus permitted visual identification of transformants carrying site-specific integration events by conidial colour (white), even when auxotrophy selection was compromised due to cross-feeding. The protocol described offers an attractive alternative to the protoplast procedure for obtaining locus-targeted transformants.

摘要

将重组DNA导入原生质体的转化技术要求较高,且依赖于商业酶制剂的可用性和批次差异。鉴于农杆菌介导的转化(ATMT)在多种致病真菌中取得的成功,我们对该方法进行了改进,以促进[具体物种名称]的转化。使用经过适当工程改造的二元载体,通过补充营养需求(尿苷/尿嘧啶营养缺陷型),首次对[具体物种名称]非同源末端连接(NHEJ)突变分生孢子进行了基因靶向ATMT。在Δ宿主基因组中高效发生了位点特异性整合。然而,与其他转化技术不同的是,发现存在从细菌到真菌的某些营养需求的交叉喂养现象,从而限制了可用于ATMT的营养缺陷型的选择。在互补试验以及比较目的中,重组盒在特定位点的整合可以提供一种减少位置效应(染色质结构)对转基因表达影响的方法。在这方面,即使由于交叉喂养导致营养缺陷型选择受到影响,靶向破坏[具体基因名称]位点也允许通过分生孢子颜色(白色)直观鉴定携带位点特异性整合事件的转化体。所描述的方案为获得位点靶向的[具体物种名称]转化体提供了一种有吸引力的替代原生质体程序的方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/8aa3e6c6a92d/jof-07-00961-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/afe062c997a5/jof-07-00961-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/16a794c066c1/jof-07-00961-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/81c62c5d2bc6/jof-07-00961-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/b1fd85ddf725/jof-07-00961-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/8aa3e6c6a92d/jof-07-00961-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/afe062c997a5/jof-07-00961-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/16a794c066c1/jof-07-00961-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/81c62c5d2bc6/jof-07-00961-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/b1fd85ddf725/jof-07-00961-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b27/8623315/8aa3e6c6a92d/jof-07-00961-g005.jpg

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本文引用的文献

1
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Front Microbiol. 2021 Feb 11;12:638096. doi: 10.3389/fmicb.2021.638096. eCollection 2021.
2
Identification of the genes encoding the catalytic steps corresponding to LRA4 (l-2-keto-3-deoxyrhamnonate aldolase) and l-lactaldehyde dehydrogenase in Aspergillus nidulans: evidence for involvement of the loci AN9425/lraD and AN0544/aldA in the l-rhamnose catabolic pathway.鉴定与 LRA4(l-2-酮-3-脱氧赤藓糖醛缩酶)和 l-乳醛脱氢酶对应的催化步骤相关的基因,这些基因在 Aspergillus nidulans 中:证据表明,位点 AN9425/lraD 和 AN0544/aldA 参与 l-鼠李糖的分解代谢途径。
Environ Microbiol. 2021 May;23(5):2420-2432. doi: 10.1111/1462-2920.15439. Epub 2021 Mar 14.
3
利用生物材料或 DNA 合成组装植物病毒农杆菌侵染克隆。
STAR Protoc. 2022 Dec 16;3(4):101716. doi: 10.1016/j.xpro.2022.101716. Epub 2022 Sep 22.
Catabolism of L-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism.在构巢曲霉中,L-鼠李糖的分解代谢通过非磷酸化途径进行,并且不受 CreA 依赖机制的葡萄糖抑制。
Microb Cell Fact. 2020 Oct 2;19(1):188. doi: 10.1186/s12934-020-01443-9.
4
CRISPR-Cas9 genome editing approaches in filamentous fungi and oomycetes.丝状真菌和卵菌中的 CRISPR-Cas9 基因组编辑方法。
Fungal Genet Biol. 2019 Sep;130:43-53. doi: 10.1016/j.fgb.2019.04.016. Epub 2019 Apr 29.
5
Methods for genetic transformation of filamentous fungi.丝状真菌遗传转化方法。
Microb Cell Fact. 2017 Oct 3;16(1):168. doi: 10.1186/s12934-017-0785-7.
6
A silver bullet in a golden age of functional genomics: the impact of -mediated transformation of fungi.功能基因组学黄金时代的一颗银弹:介导的真菌转化的影响。
Fungal Biol Biotechnol. 2017 Sep 26;4:6. doi: 10.1186/s40694-017-0035-0. eCollection 2017.
7
The Aspergillus nidulans Zn(II)2Cys6 transcription factor AN5673/RhaR mediates L-rhamnose utilization and the production of α-L-rhamnosidases.构巢曲霉Zn(II)2Cys6转录因子AN5673/RhaR介导L-鼠李糖的利用以及α-L-鼠李糖苷酶的产生。
Microb Cell Fact. 2014 Nov 22;13:161. doi: 10.1186/s12934-014-0161-9.
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Targeting fungal genes by diced siRNAs: a rapid tool to decipher gene function in Aspergillus nidulans.通过靶向 siRNAs 进行真菌基因研究:一种快速解析 Aspergillus nidulans 基因功能的工具。
PLoS One. 2013 Oct 10;8(10):e75443. doi: 10.1371/journal.pone.0075443. eCollection 2013.
9
A guide to binary vectors and strategies for targeted genome modification in fungi using Agrobacterium tumefaciens-mediated transformation.利用根癌农杆菌介导的转化进行真菌靶向基因组修饰的二进制载体和策略指南。
J Microbiol Methods. 2011 Dec;87(3):247-62. doi: 10.1016/j.mimet.2011.09.004. Epub 2011 Sep 17.
10
Fusion PCR and gene targeting in Aspergillus nidulans.构巢曲霉中的融合PCR和基因靶向
Nat Protoc. 2006;1(6):3111-20. doi: 10.1038/nprot.2006.405.