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近似家庭结构传染病模型的稳态分布。

Approximating steady state distributions for household structured epidemic models.

作者信息

Holmes Alex, Tildesley Mike, Dyson Louise

机构信息

The Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research, School of Life Sciences and Mathematics Institute, University of Warwick, Coventry CV4 7AL, United Kingdom; Mathematics for Real World Systems Centre for Doctoral Training, Mathematics Institute, University of Warwick, Coventry CV4 7AL, United Kingdom.

The Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research, School of Life Sciences and Mathematics Institute, University of Warwick, Coventry CV4 7AL, United Kingdom.

出版信息

J Theor Biol. 2022 Feb 7;534:110974. doi: 10.1016/j.jtbi.2021.110974. Epub 2021 Nov 28.

DOI:10.1016/j.jtbi.2021.110974
PMID:34852241
Abstract

Household-structured infectious disease models consider the increased transmission potential between individuals of the same household when compared with two individuals in different households. Accounting for these heterogeneities in transmission enables control measures to be more effectively planned. Ideally, pre-control data may be used to fit such a household-structured model at an endemic steady state, before making dynamic forward-predictions under different proposed strategies. However, this requires the accurate calculation of the steady states for the full dynamic model. We observe that steady state SIS dynamics with household structure cannot necessarily be described by the master equation for a single household, instead requiring consideration of the full system. However, solving the full system of equations becomes increasingly computationally intensive, particularly for higher-dimensional models. We compare two approximations to the full system: the single household master equation; and a proposed alternative method, using the Fokker-Planck equation. Moment closure is another commonly used method, but for more complicated systems, the equations quickly become unwieldy and very difficult to derive. In comparison, using the master equation for a single household is easily implementable, however it can be quite inaccurate. In this paper we compare these methods in terms of accuracy and ease of implementation. We find that there are regions of parameter space in which each method outperforms the other, and that these regions of parameter space can be characterised by the infection prevalence, or by the correlation between household states.

摘要

家庭结构传染病模型考虑到与不同家庭中的两个人相比,同一家庭中的个体之间传播潜力的增加。考虑到这些传播中的异质性能够更有效地规划控制措施。理想情况下,在根据不同的提议策略进行动态向前预测之前,可以使用控制前的数据在地方病稳态下拟合这样一个家庭结构模型。然而,这需要精确计算完整动态模型的稳态。我们观察到,具有家庭结构的稳态SIS动态不一定能用单个家庭的主方程来描述,而是需要考虑整个系统。然而,求解整个方程组的计算量越来越大,特别是对于高维模型。我们比较了对整个系统的两种近似方法:单个家庭主方程;以及一种提议的替代方法,即使用福克-普朗克方程。矩闭合是另一种常用方法,但对于更复杂的系统,方程很快变得难以处理且很难推导。相比之下,使用单个家庭的主方程很容易实现,然而它可能相当不准确。在本文中,我们从准确性和实现的难易程度方面比较了这些方法。我们发现,在参数空间中存在每个方法都优于另一个方法的区域,并且这些参数空间区域可以通过感染流行率或家庭状态之间的相关性来表征。

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Approximating steady state distributions for household structured epidemic models.近似家庭结构传染病模型的稳态分布。
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