Center for Research and Education in Aging, University of California, Berkeley, Berkeley, CA, United States.
Lawrence Berkeley National Laboratory, Berkeley, CA, United States.
Front Cell Infect Microbiol. 2021 Nov 10;11:711153. doi: 10.3389/fcimb.2021.711153. eCollection 2021.
Cell-based mathematical models have previously been developed to simulate the immune system in response to pathogens. Mathematical modeling papers which study the human immune response to pathogens have predicted concentrations of a variety of cells, including activated and resting macrophages, plasma cells, and antibodies. This study aims to create a comprehensive mathematical model that can predict cytokine levels in response to a gram-positive bacterium, by coupling previous models. To accomplish this, the cytokines Tumor Necrosis Factor Alpha (TNF-), Interleukin 6 (IL-6), Interleukin 8 (IL-8), and Interleukin 10 (IL-10) are included to quantify the relationship between cytokine release from macrophages and the concentration of the pathogen, . Partial differential equations (PDEs) are used to model cellular response and ordinary differential equations (ODEs) are used to model cytokine response, and interactions between both components produce a more robust and more complete systems-level understanding of immune activation. In the coupled cellular and cytokine model outlined in this paper, a low concentration of is used to stimulate the measured cellular response and cytokine expression. Results show that our cellular activation and cytokine expression model characterizing septic conditions can predict mechanisms in response to gram-negative and gram-positive bacteria. Our simulations provide new insights into how the human immune system responds to infections from different pathogens. Novel applications of these insights help in the development of more powerful tools and protocols in infection biology.
基于细胞的数学模型以前被开发用于模拟免疫系统对病原体的反应。研究人类免疫系统对病原体反应的数学模型预测了各种细胞的浓度,包括激活和静止的巨噬细胞、浆细胞和抗体。本研究旨在通过耦合以前的模型,创建一个可以预测革兰氏阳性菌反应细胞因子水平的综合数学模型。为此,纳入肿瘤坏死因子-α (TNF-α)、白细胞介素 6 (IL-6)、白细胞介素 8 (IL-8) 和白细胞介素 10 (IL-10) 来量化巨噬细胞细胞因子释放与病原体浓度之间的关系。偏微分方程 (PDE) 用于模拟细胞反应,常微分方程 (ODE) 用于模拟细胞因子反应,两者之间的相互作用产生了对免疫激活的更强大和更完整的系统级理解。在本文中概述的耦合细胞和细胞因子模型中,低浓度的 被用来刺激所测量的细胞反应和细胞因子表达。结果表明,我们的细胞激活和细胞因子表达模型可以预测革兰氏阴性和革兰氏阳性细菌的 机制。我们的模拟为人类免疫系统对不同病原体感染的反应提供了新的见解。这些见解的新应用有助于开发更强大的感染生物学工具和方案。