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(禾本目:禾本科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Poales: Poaceae).

作者信息

Yu Xinlian, Li Xin, Yao Xiaohua, Yao Youhua, Bai Yixiong, An Likun, Wu Kunlun

机构信息

Academy of Agricultural and Forestry Sciences, Qinghai University, Xining, Qinghai, China.

Qinghai Key Laboratory of Hulless Barley Genetics and Breeding, Xining, Qinghai, China.

出版信息

Mitochondrial DNA B Resour. 2021 Nov 23;6(12):3482-3484. doi: 10.1080/23802359.2021.2003260. eCollection 2021.

DOI:10.1080/23802359.2021.2003260
PMID:34869884
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8635538/
Abstract

() is a two-row cultivated barley used as food and as a feed crop. Chloroplast genome is an excellent way to study the genetic structure and evolutionary process of natural population of plant species in recent years. In this study, the complete chloroplast genome of was sequenced and analyzed: the size of the chloroplast genome is 136,462 bp in length, including a large single copy region (LSC) of 80,597 bp, a small single copy region (SSC) of 12,701 bp, and a pair of inverted repeated regions (IR) of 21,582 bp; the chloroplast genome encodes 129 genes, including 83 protein-coding genes, 38 tRNA genes, and eight rRNA genes; the overall GC-content of the chloroplast genome was 38.32%, with the LSC, SSC, and IR regions being 36.31%, 32.33%, and 43.83%, respectively. Phylogenetic analysis based on 32 species with the maximum likelihood (ML) method indicated that was closely related to .

摘要

()是一种用作食物和饲料作物的两行栽培大麦。叶绿体基因组是近年来研究植物物种自然种群遗传结构和进化过程的一种极佳方式。在本研究中,对()的完整叶绿体基因组进行了测序和分析:叶绿体基因组长度为136,462 bp,包括一个80,597 bp的大单拷贝区域(LSC)、一个12,701 bp的小单拷贝区域(SSC)和一对21,582 bp的反向重复区域(IR);()叶绿体基因组编码129个基因,包括83个蛋白质编码基因、38个tRNA基因和8个rRNA基因;叶绿体基因组的总体GC含量为38.32%,LSC、SSC和IR区域的GC含量分别为36.31%、32.33%和43.83%。基于32个物种采用最大似然法(ML)进行的系统发育分析表明,()与()密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a176/8635538/21b0f54c6d5a/TMDN_A_2003260_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a176/8635538/21b0f54c6d5a/TMDN_A_2003260_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a176/8635538/21b0f54c6d5a/TMDN_A_2003260_F0001_C.jpg

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本文引用的文献

1
The complete chloroplast genome of ..的完整叶绿体基因组
Mitochondrial DNA B Resour. 2020 Jul 25;5(3):2988-2989. doi: 10.1080/23802359.2020.1797552.
2
A highly mutagenised barley ( Golden Promise) TILLING population coupled with strategies for screening-by-sequencing.一个高度诱变的大麦(金承诺)TILLING群体以及基于测序的筛选策略。
Plant Methods. 2019 Aug 24;15:99. doi: 10.1186/s13007-019-0486-9. eCollection 2019.
3
fastp: an ultra-fast all-in-one FASTQ preprocessor.fastp:一个超快速的一体化 FASTQ 预处理程序。
Bioinformatics. 2018 Sep 1;34(17):i884-i890. doi: 10.1093/bioinformatics/bty560.
4
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.系统发育树的置信区间:一种使用自展法的方法。
Evolution. 1985 Jul;39(4):783-791. doi: 10.1111/j.1558-5646.1985.tb00420.x.
5
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
6
Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions.同源性搜索的挑战:HMMER3 和卷曲螺旋区域的趋同进化。
Nucleic Acids Res. 2013 Jul;41(12):e121. doi: 10.1093/nar/gkt263. Epub 2013 Apr 17.
7
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
8
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
9
Prodigal: prokaryotic gene recognition and translation initiation site identification.普罗迪格:原核基因识别和翻译起始位点鉴定。
BMC Bioinformatics. 2010 Mar 8;11:119. doi: 10.1186/1471-2105-11-119.
10
ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences.ARAGORN,一个用于在核苷酸序列中检测tRNA基因和tmRNA基因的程序。
Nucleic Acids Res. 2004 Jan 2;32(1):11-6. doi: 10.1093/nar/gkh152. Print 2004.