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卤代吡啶鎓阳离子作为卤素键供体的评估

Evaluation of Halogenopyridinium Cations as Halogen Bond Donors.

作者信息

Fotović Luka, Bedeković Nikola, Stilinović Vladimir

机构信息

Department of Chemistry, Faculty of Science, University of Zagreb, Horvatovac 102a, 10000 Zagreb, Croatia.

出版信息

Cryst Growth Des. 2021 Dec 1;21(12):6889-6901. doi: 10.1021/acs.cgd.1c00805. Epub 2021 Nov 8.

Abstract

We have performed a database survey and a structural and computational study of the potential and the limitations of halogenopyridinium cations as halogen bond donors. The database survey demonstrated that adding a positive charge on a halogenopyridine ring increases the probability that the halogen atom will participate in a halogen bond, although for chloropyridines it remains below 60%. Crystal structures of both protonated and -methylated monohalogenated pyridinium cations revealed that the iodo- and bromopyridinium cations always form halogen-bonding contacts with the iodide anions shorter than the sum of the vdW radii, while chloropyridinium cations mostly participate in longer contacts or fail to form halogen bonds. Although a DFT study of the electrostatic potential has shown that both protonation and -methylation of halogenopyridines leads to a considerable increase in the ESP of the halogen σ-hole, it is generally not the most positive site on the cation, allowing for alternate binding sites.

摘要

我们对卤代吡啶鎓阳离子作为卤素键供体的潜力和局限性进行了数据库调查以及结构和计算研究。数据库调查表明,在卤代吡啶环上添加正电荷会增加卤素原子参与卤素键的可能性,尽管对于氯吡啶而言,这一可能性仍低于60%。质子化和甲基化的单卤代吡啶鎓阳离子的晶体结构表明,碘代和溴代吡啶鎓阳离子总是与碘离子形成卤素键接触,其键长小于范德华半径之和,而氯吡啶鎓阳离子大多参与更长距离的接触或无法形成卤素键。尽管对静电势的密度泛函理论研究表明,卤代吡啶的质子化和甲基化都会导致卤素σ-空穴的静电势显著增加,但它通常不是阳离子上最正的位点,这就允许有其他的结合位点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/93d7/8641392/75d70efa191b/cg1c00805_0001.jpg

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