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核仁磷酸蛋白作为组蛋白伴侣调控口腔肿瘤发生过程中关键基因的转录。

Histone Chaperone Nucleophosmin Regulates Transcription of Key Genes Involved in Oral Tumorigenesis.

机构信息

Transcription and Disease Laboratory, Molecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Researchgrid.419636.f, Jakkur, Bangalore, Karnataka, India.

Division of Pharmacology, CSIR-Central Drug Research Institute, Lucknow, Uttar Pradesh, India.

出版信息

Mol Cell Biol. 2022 Feb 17;42(2):e0066920. doi: 10.1128/MCB.00669-20. Epub 2021 Dec 13.

Abstract

Nucleophosmin (NPM1) is a multifunctional histone chaperone that can activate acetylation-dependent transcription from chromatin templates . p300-mediated acetylation of NPM1 has been shown to further enhance its transcription activation potential. Acetylated and total NPM1 pools are increased in oral squamous cell carcinoma. However, the role of NPM1 or its acetylated form (AcNPM1) in transcriptional regulation in cells and oral tumorigenesis is not fully elucidated. Using ChIP-seq analyses, we provide the first genome-wide profile of AcNPM1 and show that AcNPM1 is enriched at transcriptional regulatory elements. AcNPM1 co-occupies marks of active transcription at promoters and DNase I hypersensitive sites at enhancers. In addition, using a high-throughput protein interaction profiling approach, we show that NPM1 interacts with RNA Pol II, general transcription factors, mediator subunits, histone acetyltransferase complexes, and chromatin remodelers. NPM1 histone chaperone activity also contributes to its transcription activation potential. Further, NPM1 depletion leads to decreased AcNPM1 occupancy and reduced expression of genes required for proliferative, migratory and invasive potential of oral cancer cells. NPM1 depletion also abrogates the growth of orthotopic tumors in mice. Collectively, these results establish that AcNPM1 functions as a coactivator during during RNA polymerase II-driven transcription and regulates the expression of genes that promote oral tumorigenesis.

摘要

核仁磷酸蛋白(Nucleophosmin,NPM1)是一种多功能组蛋白伴侣,能够激活染色质模板上依赖于乙酰化的转录。已有研究表明,p300 介导的 NPM1 乙酰化作用可进一步增强其转录激活潜能。口腔鳞状细胞癌中乙酰化和总 NPM1 池增加。然而,NPM1 或其乙酰化形式(AcNPM1)在细胞和口腔肿瘤发生中的转录调控作用尚未完全阐明。通过 ChIP-seq 分析,我们提供了 AcNPM1 的首个全基因组图谱,并表明 AcNPM1 富集在转录调控元件上。AcNPM1 与启动子上的活跃转录标记和增强子上的 DNA 酶 I 超敏位点共同占据。此外,我们使用高通量蛋白质相互作用分析方法,表明 NPM1 与 RNA 聚合酶 II、一般转录因子、中介亚基、组蛋白乙酰转移酶复合物和染色质重塑因子相互作用。NPM1 组蛋白伴侣活性也有助于其转录激活潜能。此外,NPM1 耗竭导致 AcNPM1 占据减少和口腔癌细胞增殖、迁移和侵袭潜能所需基因的表达降低。NPM1 耗竭还消除了小鼠原位肿瘤的生长。总之,这些结果表明,AcNPM1 在 RNA 聚合酶 II 驱动的转录过程中作为共激活因子发挥作用,并调节促进口腔肿瘤发生的基因表达。

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