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水生真菌的分类学相关性转化为硝酸还原酶基因较低的遗传差异。

Aquatic Hyphomycete Taxonomic Relatedness Translates into Lower Genetic Divergence of the Nitrate Reductase Gene.

作者信息

Mariz Joana, Franco-Duarte Ricardo, Cássio Fernanda, Pascoal Cláudia, Fernandes Isabel

机构信息

Centre of Molecular and Environmental Biology (CBMA), Department of Biology, University of Minho, 4710-057 Braga, Portugal.

Institute of Science and Innovation for Bio-Sustainability (IB-S), University of Minho, 4710-057 Braga, Portugal.

出版信息

J Fungi (Basel). 2021 Dec 11;7(12):1066. doi: 10.3390/jof7121066.

Abstract

Aquatic hyphomycetes are key microbial decomposers in freshwater that are capable of producing extracellular enzymes targeting complex molecules of leaf litter, thus, being crucial to nutrient cycling in these ecosystems. These fungi are also able to assimilate nutrients (e.g., nitrogen) from stream water, immobilizing these nutrients in the decomposing leaf litter and increasing its nutritional value for higher trophic levels. Evaluating the aquatic hyphomycete functional genetic diversity is, thus, pivotal to understanding the potential impacts of biodiversity loss on nutrient cycling in freshwater. In this work, the inter- and intraspecific taxonomic (ITS1-5.8S-ITS2 region) and functional (nitrate reductase gene) diversity of 40 aquatic hyphomycete strains, belonging to 23 species, was evaluated. A positive correlation was found between the taxonomic and nitrate reductase gene divergences. Interestingly, some cases challenged this trend: (Orbiliomycetes) and (Sordariomycetes), which were phylogenetically identical but highly divergent regarding the nitrate reductase gene; and and (Leotiomycetes), which exhibited moderate taxonomic divergence but no divergence in the nitrate reductase gene. Additionally, (Leotiomycetes) strains were phylogenetically identical but displayed a degree of nitrate reductase gene divergence above the average for the interspecific level. Overall, both inter- and intraspecific functional diversity were observed among aquatic hyphomycetes.

摘要

水生真菌是淡水中关键的微生物分解者,能够产生针对落叶复杂分子的胞外酶,因此对这些生态系统中的养分循环至关重要。这些真菌还能够从溪水中吸收养分(如氮),将这些养分固定在正在分解的落叶中,并提高其对更高营养级的营养价值。因此,评估水生真菌的功能遗传多样性对于理解生物多样性丧失对淡水养分循环的潜在影响至关重要。在这项工作中,对属于23个物种的40株水生真菌菌株的种间和种内分类学(ITS1-5.8S-ITS2区域)和功能(硝酸还原酶基因)多样性进行了评估。发现分类学和硝酸还原酶基因分歧之间存在正相关。有趣的是,有些情况挑战了这一趋势:( Orbiliomycetes)和( Sordariomycetes),它们在系统发育上相同,但在硝酸还原酶基因方面差异很大;以及和( Leotiomycetes),它们表现出中等程度的分类学差异,但在硝酸还原酶基因上没有差异。此外,( Leotiomycetes)菌株在系统发育上相同,但显示出的硝酸还原酶基因分歧程度高于种间水平的平均水平。总体而言,在水生真菌中观察到了种间和种内功能多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c99/8708292/ff2b53643f0d/jof-07-01066-g001.jpg

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