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一种新型噬菌体vB_EcoA_RDN8.1的特性、基因组分析及其对印度多药耐药和广泛耐药的形成生物膜的尿路致病性大肠杆菌分离株的体外活性

Characterization, genome analysis and in vitro activity of a novel phage vB_EcoA_RDN8.1 active against multi-drug resistant and extensively drug-resistant biofilm-forming uropathogenic Escherichia coli isolates, India.

作者信息

Chaudhary Naveen, Mohan Balvinder, Mavuduru Ravimohan S, Kumar Yashwant, Taneja Neelam

机构信息

Department of Medical Microbiology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.

Department of Urology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.

出版信息

J Appl Microbiol. 2022 Apr;132(4):3387-3404. doi: 10.1111/jam.15439. Epub 2022 Jan 17.

DOI:10.1111/jam.15439
PMID:34989075
Abstract

AIM

We aimed to study host range, stability, genome and antibiofilm activity of a novel phage vB_EcoA_RDN8.1 active against multi-drug resistant (MDR) and extensively drug-resistant (XDR) biofilm-forming uropathogenic Escherichia coli isolates.

METHODS AND RESULTS

A novel lytic phage vB_EcoA_RDN8.1 active against UPEC strains resistant to third-generation cephalosporins, fluoroquinolones, aminoglycosides, imipenem, beta-lactamase inhibitor combination and polymyxins was isolated from community raw sewage water of Chandigarh. It exhibited a clear plaque morphology and a burst size of 250. In the time-kill assay, the maximum amount of killing was achieved at MOI 1.0. vB_EcoA_RDN8.1 belongs to the family Autographiviridae, has a genome size of 39.5 kb with a GC content of 51.6%. It was stable over a wide range of temperatures and pH. It was able to inhibit biofilm formation which may be related to an endolysin encoded by ORF 19.

CONCLUSIONS

The vB_EcoA_RDN8.1 is a novel lytic phage that has the potential for inclusion into phage cocktails being developed for the treatment of urinary tract infections (UTIs) caused by highly drug-resistant UPEC.

SIGNIFICANCE AND IMPACT OF THE STUDY

We provide a detailed characterization of a novel lytic Escherichia phage with antibiofilm activity having a potential application against MDR and XDR UPEC causing UTIs.

摘要

目的

我们旨在研究一种新型噬菌体vB_EcoA_RDN8.1的宿主范围、稳定性、基因组及抗生物膜活性,该噬菌体对多药耐药(MDR)和广泛耐药(XDR)的形成生物膜的尿路致病性大肠杆菌分离株具有活性。

方法与结果

从昌迪加尔的社区生活污水中分离出一种新型裂解性噬菌体vB_EcoA_RDN8.1,它对耐第三代头孢菌素、氟喹诺酮类、氨基糖苷类、亚胺培南、β-内酰胺酶抑制剂组合和多粘菌素的尿路致病性大肠杆菌菌株具有活性。它呈现出清晰的噬菌斑形态,裂解量为250。在时间-杀菌试验中,感染复数(MOI)为1.0时达到最大杀菌量。vB_EcoA_RDN8.1属于光滑噬菌体科,基因组大小为39.5 kb,GC含量为51.6%。它在很宽的温度和pH范围内都很稳定。它能够抑制生物膜形成,这可能与开放阅读框19编码的一种内溶素有关。

结论

vB_EcoA_RDN8.1是一种新型裂解性噬菌体,有潜力被纳入正在研发的用于治疗由高度耐药尿路致病性大肠杆菌引起的尿路感染(UTIs)的噬菌体鸡尾酒制剂中。

研究的意义与影响

我们详细表征了一种具有抗生物膜活性的新型裂解性大肠杆菌噬菌体,其对引起尿路感染的MDR和XDR尿路致病性大肠杆菌具有潜在应用价值。

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