Li Chunyu, Yang Tianmi, Ou Ruwei, Shang Huifang
Department of Neurology, Laboratory of Neurodegenerative Disorders, National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University, Chengdu, China.
Front Cell Dev Biol. 2021 Dec 24;9:797072. doi: 10.3389/fcell.2021.797072. eCollection 2021.
Epidemiological and clinical studies have suggested comorbidity between schizophrenia and several neurodegenerative disorders. However, little is known whether there exists shared genetic architecture. To explore their relationship from a genetic and transcriptomic perspective, we applied polygenic and linkage disequilibrium-informed methods to examine the genetic correlation between schizophrenia and amyotrophic lateral sclerosis (ALS), Parkinson's disease, Alzheimer's disease and frontotemporal dementia. We further combined genome-wide association summary statistics with large-scale transcriptomic datasets, to identify putative shared genes and explore related pathological tissues. We identified positive and significant correlation between schizophrenia and ALS at genetic (correlation 0.22; 95% CI: 0.16-0.28; = 4.00E-04) and transcriptomic (correlation 0.08; 95% CI: 0.04-0.11; = 0.034) levels. We further demonstrated that schizophrenia- and ALS-inferred gene expression overlap significantly in four tissues including skin, small intestine, brain cortex and lung, and highlighted three genes, namely , and as potential mediators of the correlation between schizophrenia and ALS. Our findings revealed overlapped gene expression profiles in specific tissues between schizophrenia and ALS, and identified novel potential shared genes. These results provided a better understanding for the pleiotropy of schizophrenia, and paved way for future studies to further elucidate the molecular drivers of schizophrenia.
流行病学和临床研究表明,精神分裂症与几种神经退行性疾病之间存在共病现象。然而,对于它们是否存在共同的遗传结构却知之甚少。为了从遗传和转录组学角度探索它们之间的关系,我们应用多基因和连锁不平衡信息方法来检验精神分裂症与肌萎缩侧索硬化症(ALS)、帕金森病、阿尔茨海默病和额颞叶痴呆之间的遗传相关性。我们进一步将全基因组关联汇总统计数据与大规模转录组数据集相结合,以识别假定的共享基因并探索相关的病理组织。我们在遗传水平(相关性0.22;95%置信区间:0.16 - 0.28;P = 4.00E - 04)和转录组水平(相关性0.08;95%置信区间:0.04 - 0.11;P = 0.034)上发现精神分裂症与ALS之间存在正相关且具有统计学意义。我们进一步证明,精神分裂症和ALS推断的基因表达在皮肤、小肠、大脑皮层和肺这四种组织中显著重叠,并突出了三个基因,即[具体基因1]、[具体基因2]和[具体基因3],作为精神分裂症与ALS之间相关性的潜在介导因子。我们的研究结果揭示了精神分裂症和ALS在特定组织中的重叠基因表达谱,并确定了新的潜在共享基因。这些结果为精神分裂症的多效性提供了更好的理解,并为未来进一步阐明精神分裂症分子驱动因素的研究铺平了道路。