Future Biomanufacturing Research Hub, Manchester Institute of Biotechnology, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK.
Manchester Institute of Biotechnology and Department of Chemistry, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK.
Chembiochem. 2022 Mar 4;23(5):e202100688. doi: 10.1002/cbic.202100688. Epub 2022 Jan 19.
Monoterpene synthases are often promiscuous enzymes, yielding product mixtures rather than pure compounds due to the nature of the branched reaction mechanism involving reactive carbocations. Two previously identified bacterial monoterpene synthases, a linalool synthase (bLinS) and a cineole synthase (bCinS), produce nearly pure linalool and cineole from geranyl diphosphate, respectively. We used a combined experimental and computational approach to identify critical residues involved in bacterial monoterpenoid synthesis. Phe77 is essential for bCinS activity, guiding the linear carbocation intermediate towards the formation of the cyclic α-terpinyl intermediate; removal of the aromatic ring results in variants that produce acyclic products only. Computational chemistry confirmed the importance of Phe77 in carbocation stabilisation. Phe74, Phe78 and Phe179 are involved in maintaining the active site shape in bCinS without a specific role for the aromatic ring. Phe295 in bLinS, and the equivalent Ala301 in bCinS, are essential for linalool and cineole formation, respectively. Where Phe295 places steric constraints on the carbocation intermediates, Ala301 is essential for bCinS initial cyclisation and activity. Our multidisciplinary approach gives unique insights into how carefully placed amino acid residues in the active site can direct carbocations down specific paths, by placing steric constraints or offering stabilisation via cation-π interactions.
单萜合酶通常是混杂酶,由于涉及反应性碳正离子的支化反应机制的性质,产生的是产物混合物而不是纯化合物。两种先前鉴定的细菌单萜合酶,即芳樟醇合酶(bLinS)和桉叶油醇合酶(bCinS),分别从香叶基二磷酸产生几乎纯的芳樟醇和桉叶油醇。我们使用组合实验和计算方法来鉴定参与细菌单萜合成的关键残基。Phe77 对 bCinS 活性至关重要,引导线性碳正离子中间体形成环状α-萜品烯中间体;去除芳环会导致产生无环产物的变体。计算化学证实了 Phe77 在碳正离子稳定化中的重要性。Phe74、Phe78 和 Phe179 参与在 bCinS 中维持活性位点形状,而芳环没有特定作用。bLinS 中的 Phe295 和 bCinS 中的等效 Ala301 分别是形成芳樟醇和桉叶油醇所必需的。Phe295 对碳正离子中间体施加空间位阻,Ala301 对 bCinS 的初始环化和活性是必需的。我们的多学科方法提供了独特的见解,了解活性位点中精心放置的氨基酸残基如何通过施加空间位阻或通过阳离子-π 相互作用提供稳定化来引导碳正离子沿着特定路径前进。