Tabebi Mouna, Kumar Dutta Ravi, Skoglund Camilla, Söderkvist Peter, Gimm Oliver
Department of Biomedical and Clinical Sciences (BKV), Linköping University, 581 83 Linköping, Sweden.
Clinical Genomics Linköping, Science for Life Laboratory, Linköping University, 581 83 Linköping, Sweden.
Int J Mol Sci. 2022 Jan 5;23(1):560. doi: 10.3390/ijms23010560.
Enzymes of tricarboxylic acid (TCA) have recently been recognized as tumor suppressors. Mutations in the SDHB subunit of succinate dehydrogenase (SDH) cause pheochromocytomas and paragangliomas (PCCs/PGLs) and predispose patients to malignant disease with poor prognosis.
Using the human pheochromocytoma cell line (hPheo1), we knocked down SDHB gene expression using CRISPR-cas9 technology.
Microarray gene expression analysis showed that >500 differentially expressed gene targets, about 54%, were upregulated in response to SDHB knock down. Notably, genes involved in glycolysis, hypoxia, cell proliferation, and cell differentiation were up regulated, whereas genes involved in oxidative phosphorylation (OXPHOS) were downregulated. In vitro studies show that hPheo1 proliferation is not affected negatively and the cells that survive by shifting their metabolism to the use of glutamine as an alternative energy source and promote OXPHOS activity. Knock down of SDHB expression results in a significant increase in expression in hPheo1 cells cultured as monolayer or as 3D culture. Analysis of TCGA data confirms the enhancement of in mutated/low expressed PCCs/PGLs.
Our data suggest that the downregulation of SDHB in PCCs/PGLs results in increased expression and may represent a potential biomarker and therapeutic target in SDHB mutated tumors and SDHB loss of activity-dependent diseases.
三羧酸(TCA)循环中的酶最近被认为是肿瘤抑制因子。琥珀酸脱氢酶(SDH)的SDHB亚基突变会导致嗜铬细胞瘤和副神经节瘤(PCCs/PGLs),并使患者易患预后不良的恶性疾病。
我们使用人嗜铬细胞瘤细胞系(hPheo1),利用CRISPR-cas9技术敲低SDHB基因表达。
基因芯片基因表达分析显示,超过500个差异表达的基因靶点(约54%)在SDHB敲低后上调。值得注意的是,参与糖酵解、缺氧、细胞增殖和细胞分化的基因上调,而参与氧化磷酸化(OXPHOS)的基因下调。体外研究表明,hPheo1的增殖未受到负面影响,细胞通过将代谢转变为利用谷氨酰胺作为替代能源并促进OXPHOS活性而存活。敲低SDHB表达导致在单层培养或三维培养的hPheo1细胞中 表达显著增加。对TCGA数据的分析证实了在突变/低表达的PCCs/PGLs中 增强。
我们的数据表明,PCCs/PGLs中SDHB的下调导致 表达增加,这可能代表SDHB突变肿瘤和SDHB活性丧失相关疾病中的一种潜在生物标志物和治疗靶点。