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Neuroimage Clin. 2021;31:102733. doi: 10.1016/j.nicl.2021.102733. Epub 2021 Jun 17.
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Evolution of Human Brain Atlases in Terms of Content, Applications, Functionality, and Availability.人类大脑图谱在内容、应用、功能和可用性方面的演变。
Neuroinformatics. 2021 Jan;19(1):1-22. doi: 10.1007/s12021-020-09481-9.
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International Brain Initiative: An Innovative Framework for Coordinated Global Brain Research Efforts.国际脑计划:协调全球脑研究努力的创新性框架。
Neuron. 2020 Jan 22;105(2):212-216. doi: 10.1016/j.neuron.2020.01.002.
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Neuroethical Issues of the Brain/MINDS Project of Japan.日本脑/MINDS 计划的神经伦理学问题。
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3D Atlas of the Brain, Head and Neck in 2953 pieces.2953片脑部、头部和颈部的三维图谱。
Neuroinformatics. 2017 Oct;15(4):395-400. doi: 10.1007/s12021-017-9339-8.
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Human Connectomics across the Life Span.人类全生命周期连接组学
Trends Cogn Sci. 2017 Jan;21(1):32-45. doi: 10.1016/j.tics.2016.10.005. Epub 2016 Nov 16.
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The Human Brain Project: Creating a European Research Infrastructure to Decode the Human Brain.人类脑计划:创建一个解码人类大脑的欧洲研究基础设施。
Neuron. 2016 Nov 2;92(3):574-581. doi: 10.1016/j.neuron.2016.10.046.
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Resource atlases for multi-atlas brain segmentations with multiple ontology levels based on T1-weighted MRI.基于T1加权磁共振成像的具有多个本体层次的多图谱脑部分割资源图谱集。
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NOWinBRAIN:一个大型、系统且可扩展的活体人脑及头颈部三维重建图像数据库。

NOWinBRAIN: a Large, Systematic, and Extendable Repository of 3D Reconstructed Images of a Living Human Brain Cum Head and Neck.

机构信息

Nowinski Brain Foundation, Warsaw West County, P.O. Box 56, 05-092, Lomianki, Poland.

出版信息

J Digit Imaging. 2022 Apr;35(2):98-114. doi: 10.1007/s10278-021-00528-0. Epub 2022 Jan 10.

DOI:10.1007/s10278-021-00528-0
PMID:35013825
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8921370/
Abstract

Despite the tremendous development of various brain-related resources, a large, systematic, comprehensive, extendable, and beautiful repository of 3D reconstructed images of a living human brain expanded to the head and neck is not yet available. I have created such a novel repository and populated it with images derived from a 3D atlas constructed from 3/7 Tesla MRI and high-resolution CT scans. This web-based repository contains 6 galleries hierarchically organized in 444 albums and sub-albums with 5,156 images. Its original features include a systematic design in terms of multiple standard views, modes of presentation, and spatially co-registered image sequences; multi-tissue class galleries constructed from 26 primary tissue classes and 199 sub-classes; and a unique image naming syntax enabling image searching based solely on the image name. Anatomic structures are displayed in 6 standard views (anterior, left, posterior, right, superior, inferior), all views having the same brain size, and optionally with additional arbitrary views. In each view, the images are shown as sequences in three standard modes of presentation, non-parcellated unlabeled, parcellated unlabeled, and parcellated labeled. There are two types of spatially co-registered image sequences (imitating image layers and enabling animation creation), the appearance image sequence (for standard views) and the context image sequence (with a growing number of tissue classes). Color-coded neuroanatomic content makes the brain beautiful and facilitates its learning and understanding. This unique repository is freely available and easily accessible online at www.nowinbrain.org for a wide spectrum of users in medicine and beyond. Its future extensions are in progress.

摘要

尽管各种与大脑相关的资源已经得到了极大的发展,但一个大规模、系统、全面、可扩展且美观的人类活体大脑 3D 重建图像库,包括头部和颈部,仍然尚未建立。我创建了这样一个新颖的知识库,并使用源自 3/7 Tesla MRI 和高分辨率 CT 扫描构建的 3D 图谱衍生的图像进行填充。

这个基于网络的知识库包含 6 个按层次结构组织的画廊,分为 444 个相册和子相册,共有 5156 张图像。它的原始特点包括:在多个标准视图、呈现模式和空间配准图像序列方面具有系统的设计;由 26 个主要组织类别和 199 个子类别构建的多组织类别画廊;以及独特的图像命名语法,允许仅根据图像名称进行图像搜索。解剖结构以 6 个标准视图(前、左、后、右、上、下)显示,所有视图的大脑大小相同,并且可以选择添加任意视图。在每个视图中,图像以三种标准呈现模式(非分割未标记、分割未标记和分割标记)显示为序列。有两种类型的空间配准图像序列(模仿图像层并支持动画创建),即外观图像序列(用于标准视图)和上下文图像序列(具有越来越多的组织类别)。彩色编码的神经解剖内容使大脑更加美观,并有助于学习和理解。

这个独特的知识库是免费的,并且可以轻松在线访问,网址为 www.nowinbrain.org,适用于医学及其他领域的广泛用户。它的未来扩展正在进行中。