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受自然启发的多酶固定化:策略和概念。

Nature Inspired Multienzyme Immobilization: Strategies and Concepts.

机构信息

Institute of Molecular Medicine, Jamia Hamdard, New Delhi 110062, India.

Department of Materials Science and Engineering, Indian institute of Technology Delhi, New Delhi 110016, India.

出版信息

ACS Appl Bio Mater. 2021 Feb 15;4(2):1077-1114. doi: 10.1021/acsabm.0c01293. Epub 2021 Jan 14.

DOI:10.1021/acsabm.0c01293
PMID:35014469
Abstract

In a biological system, the spatiotemporal arrangement of enzymes in a dense cellular milieu, subcellular compartments, membrane-associated enzyme complexes on cell surfaces, scaffold-organized proteins, protein clusters, and modular enzymes have presented many paradigms for possible multienzyme immobilization designs that were adapted artificially. In metabolic channeling, the catalytic sites of participating enzymes are close enough to channelize the transient compound, creating a high local concentration of the metabolite and minimizing the interference of a competing pathway for the same precursor. Over the years, these phenomena had motivated researchers to make their immobilization approach naturally realistic by generating multienzyme fusion, cluster formation via affinity domain-ligand binding, cross-linking, conjugation on/in the biomolecular scaffold of the protein and nucleic acids, and self-assembly of amphiphilic molecules. This review begins with the discussion of substrate channeling strategies and recent empirical efforts to build it synthetically. After that, an elaborate discussion covering prevalent concepts related to the enhancement of immobilized enzymes' catalytic performance is presented. Further, the central part of the review summarizes the progress in nature motivated multienzyme assembly over the past decade. In this section, special attention has been rendered by classifying the nature-inspired strategies into three main categories: (i) multienzyme/domain complex mimic (scaffold-free), (ii) immobilization on the biomolecular scaffold, and (iii) compartmentalization. In particular, a detailed overview is correlated to the natural counterpart with advances made in the field. We have then discussed the beneficial account of coassembly of multienzymes and provided a synopsis of the essential parameters in the rational coimmobilization design.

摘要

在生物系统中,酶在密集的细胞环境、亚细胞隔室、细胞表面上的膜相关酶复合物、支架组织蛋白、蛋白质簇和模块化酶中的时空排列为可能的多酶固定化设计提供了许多范例,这些设计是人为适应的。在代谢沟通过程中,参与酶的催化位点足够接近以沟道化瞬态化合物,从而在代谢物局部产生高浓度,并最小化相同前体的竞争途径的干扰。多年来,这些现象促使研究人员通过生成多酶融合、通过亲和结构域-配体结合、交联、在蛋白质和核酸的生物分子支架上的缀合以及两亲分子的自组装来使他们的固定化方法自然地现实化。这篇综述首先讨论了底物沟道化策略以及近年来构建它的合成努力。之后,通过详细讨论与固定化酶催化性能增强相关的流行概念进行了阐述。此外,综述的核心部分总结了过去十年中受自然启发的多酶组装的进展。在这一部分中,通过将自然启发的策略分为三类进行了分类:(i)多酶/结构域复合物模拟(无支架),(ii)在生物分子支架上的固定化,和(iii)分隔化。特别地,与该领域取得的进展相关,对自然对应物进行了详细概述。然后,我们讨论了多酶共组装的有益作用,并提供了合理共固定化设计中基本参数的概述。

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