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来自……的β-碳酸酐酶1(βCA1)可变剪接变体的鉴定及分子特征分析

Identification and molecular characterization of the alternative spliced variants of beta carbonic anhydrase 1 (βCA1) from .

作者信息

Shen Jinyu, Li Zhiyong, Fu Yajuan, Liang Jiansheng

机构信息

Department of Biology, Southern University of Science and Technology, Shenzhen, China.

Academy for Advanced Interdisciplinary Studies, Southern University of Science and Technology, Shenzhen, China.

出版信息

PeerJ. 2021 Dec 23;9:e12673. doi: 10.7717/peerj.12673. eCollection 2021.

Abstract

Carbonic anhydrases (CAs) are ubiquitous zinc metalloenzymes that catalyze the interconversion of carbon dioxide and bicarbonate. Higher plants mainly contain the three evolutionarily distinct CA families αCA, βCA, and γCA, with each represented by multiple isoforms. Alternative splicing (AS) of the CA transcripts is common. However, there is little information on the spliced variants of individual CA isoforms. In this study, we focused on the characterization of spliced variants of βCA1 from . The expression patterns and subcellular localization of the individual spliced variants of βCA1 were examined. The results showed that the spliced variants of βCA1 possessed different subcellular and tissue distributions and responded differently to environmental stimuli. Additionally, we addressed the physiological role of βCA1 in heat stress response and its protein-protein interaction (PPI) network. Our results showed that was regulated by heat stresses, and mutant was hypersensitive to heat stress, indicating a role for βCA1 in heat stress response. Furthermore, PPI network analysis revealed that βCA1 interacts with multiple proteins involved in several processes, including photosynthesis, metabolism, and the stress response, and these will provide new avenues for future investigations of βCA1.

摘要

碳酸酐酶(CAs)是普遍存在的锌金属酶,可催化二氧化碳和碳酸氢盐的相互转化。高等植物主要包含三个进化上不同的CA家族αCA、βCA和γCA,每个家族都有多种同工型。CA转录本的可变剪接(AS)很常见。然而,关于单个CA同工型的剪接变体的信息很少。在本研究中,我们重点研究了来自[具体来源未给出]的βCA1剪接变体的特征。检测了βCA1各个剪接变体的表达模式和亚细胞定位。结果表明,βCA1的剪接变体具有不同的亚细胞和组织分布,对环境刺激的反应也不同。此外,我们探讨了βCA1在热应激反应中的生理作用及其蛋白质-蛋白质相互作用(PPI)网络。我们的结果表明[具体内容未给出]受热应激调节,[具体内容未给出]突变体对热应激高度敏感,表明βCA1在热应激反应中起作用。此外,PPI网络分析显示,βCA1与参与多个过程的多种蛋白质相互作用,包括光合作用、代谢和应激反应,这些将为未来对βCA1的研究提供新途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b161/8710251/e6dc7f2a9f0f/peerj-09-12673-g001.jpg

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