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南极海绵相关细菌群落的宿主特异性和功能潜力的变异性

Variability in Host Specificity and Functional Potential of Antarctic Sponge-Associated Bacterial Communities.

作者信息

Cristi Antonia, Parada-Pozo Génesis, Morales-Vicencio Felipe, Cárdenas César A, Trefault Nicole

机构信息

Centro GEMA - Genómica, Ecología y Medio Ambiente, Facultad de Ciencias, Universidad Mayor, Santiago, Chile.

Department of Marine Science, University of Otago, Dunedin, New Zealand.

出版信息

Front Microbiol. 2022 Jan 13;12:771589. doi: 10.3389/fmicb.2021.771589. eCollection 2021.

Abstract

Sponge-associated microorganisms are essential for sponge survival. They play an important role in recycling nutrients and, therefore, in the maintenance of the ecosystem. These microorganisms are diverse, species-specific, and different from those in the surrounding seawater. Bacterial sponge symbionts have been extensively studied in the tropics; however, little is known about these microorganisms in sponges from high-latitude environments. Sponges can cover up to 80% of the benthos in Antarctica and are crucial architects for the marine food web. In this study, we present analyses of the bacterial symbionts of three sponges: sp., , and from the Western Antarctic Peninsula (WAP) with the aim to determine variations on the specificity of the bacteria-sponge interactions and potential signatures on their predicted functional profiles. We use high-throughput 16S rRNA gene sequencing of 30 sponge individuals inhabiting South Bay (Palmer Archipelago, WAP) to describe their microbiome taxonomy and diversity and predict potential functional profiles based on this marker gene. Our work shows similar bacterial community composition profiles among the same sponge species, although the symbiotic relationship is not equally conserved among the three Antarctic sponges. The number of species-specific core operational taxonomic units (OTUs) of these Antarctic sponges was low, with important differences between the total abundance accounted for these OTUs. Only eight OTUs were shared between the three sponge species. Analyses of the functional potential revealed that despite the high host-symbiont specificity, the inferred functions are conserved among these microbiomes, although with differences in the abundance of specific functions. showed the highest level of intra-specificity and a higher potential of pathways related to energy metabolism, metabolisms of terpenoids and polyketides, and biosynthesis of other secondary metabolites. Overall, this work shows variations in the specificity of the sponge-associated bacterial communities, differences in how hosts and symbionts establish their relations, and in their potential functional capabilities.

摘要

与海绵相关的微生物对海绵的生存至关重要。它们在营养物质循环中发挥着重要作用,进而对生态系统的维持也起着重要作用。这些微生物种类多样、具有物种特异性,且与周围海水中的微生物不同。热带地区对海绵细菌共生体进行了广泛研究;然而,对于高纬度环境中海绵体内的这些微生物却知之甚少。海绵在南极洲可覆盖高达80%的底栖生物,是海洋食物网的关键构建者。在本研究中,我们对来自南极半岛西部(WAP)的三种海绵:、和的细菌共生体进行了分析,目的是确定细菌与海绵相互作用特异性的变化以及它们预测功能谱上的潜在特征。我们对栖息在南湾(帕尔默群岛,WAP)的30个海绵个体进行了高通量16S rRNA基因测序,以描述它们的微生物群落分类和多样性,并基于该标记基因预测潜在的功能谱。我们的研究表明,同一海绵物种之间具有相似的细菌群落组成谱,尽管这三种南极海绵之间的共生关系并非同等保守。这些南极海绵的物种特异性核心操作分类单元(OTU)数量较少,这些OTU在总丰度上存在重要差异。三种海绵物种之间仅共享8个OTU。功能潜力分析表明,尽管宿主与共生体特异性较高,但这些微生物群落之间推断的功能是保守的,尽管特定功能的丰度存在差异。显示出最高水平的种内特异性以及与能量代谢、萜类和聚酮类代谢以及其他次生代谢物生物合成相关途径的更高潜力。总体而言,这项工作展示了与海绵相关细菌群落特异性的变化、宿主与共生体建立关系方式的差异以及它们潜在的功能能力差异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bbe0/8792898/20fd758a327c/fmicb-12-771589-g001.jpg

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