Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University, Daejeon, Republic of Korea.
J Med Food. 2022 Feb;25(2):130-137. doi: 10.1089/jmf.2021.K.0085.
COVID-19 has become a global infectious pandemic affecting the entire world with complications related to the lungs and compromised immune systems. Recently, cytokine storms, which are hallmarks of the disease, have been identified in most COVID-19 patients. In addition, vitamin D deficiency is increasingly appearing to be another element exposing COVID-19 patients to a preferential increase in their symptoms. In an effort to identify a possible link between cytokine storms and vitamin D deficiency to streamline a possible treatment, an analysis using bioinformatics approach was performed using collections of highly expressed cytokines in both severe acute respiratory syndrome and COVID-19 patients (commonly elevated cytokines) as well as vitamin D deficiency-associated genes (VD). Gene Multiple Association Network Integration Algorithm was used for network interactions, whereas the Enrichr enrichment analysis tool was used for biological functions. The network analysis GLay clustering results indicated the vitamin D receptor as a possible link between these two groups. Furthermore, cell chemotaxis and chemotactic-related features were identified as significantly affected pathways, which serve as possible key players mitigating cytokine storms under low vitamin D availability.
新型冠状病毒肺炎(COVID-19)已成为一种影响全球的传染性大流行疾病,其并发症与肺部和免疫系统受损有关。最近,大多数 COVID-19 患者都出现了细胞因子风暴,这是该疾病的特征之一。此外,维生素 D 缺乏症似乎越来越成为使 COVID-19 患者症状恶化的另一个因素。为了确定细胞因子风暴与维生素 D 缺乏症之间是否存在关联,以便简化可能的治疗方法,我们使用生物信息学方法对严重急性呼吸综合征和 COVID-19 患者(通常升高的细胞因子)中高表达细胞因子的集合以及维生素 D 缺乏相关基因(VD)进行了分析。基因多重关联网络集成算法用于网络相互作用,而 Enrichr 富集分析工具用于生物学功能。网络分析 GLay 聚类结果表明维生素 D 受体可能是这两组之间的联系。此外,细胞趋化和趋化相关特征被确定为受显著影响的途径,这些途径可能是在维生素 D 供应不足的情况下减轻细胞因子风暴的关键因素。