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环状RNA的特异性表达及功能

Specific expression and functions of circular RNAs.

作者信息

Misir Sema, Wu Nan, Yang Burton B

机构信息

Sunnybrook Research Institute, and Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Canada.

出版信息

Cell Death Differ. 2022 Mar;29(3):481-491. doi: 10.1038/s41418-022-00948-7. Epub 2022 Feb 15.

DOI:10.1038/s41418-022-00948-7
PMID:35169296
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8901656/
Abstract

In recent years, circular RNAs (circRNAs), a new class of RNA molecules characterized by their covalently closed circular structure, have become a new research paradigm in RNA biology. Many circRNAs are conserved among eukaryotes, localize in specific subcellular compartments, and play different biological roles. Accumulating evidence shows that circRNAs regulate a diversity of cellular processes by acting as miRNA sponges, anchors for circRNA binding proteins (cRBPs), transcriptional regulators, molecular scaffolds, and sources for translation of small proteins/peptides. The emergence of the biological functions of circRNAs has brought a new perspective to our understanding of cellular physiology and disease pathogenesis. Recent studies have shown that the expression of circRNAs is tissue- and cell type-specific and specifically regulated through development or disease progression, where they exert specific biological functions. However, the mechanisms underlying these remain largely unknown. A deeper understanding of how the specific expression of circRNAs is regulated to exert specific biological functions will enable the use of circRNA as a biomarker in clinical practice and the development of new therapeutic approaches. This review aims to summarize recent developments in circRNA biogenesis, functions, and molecular mechanisms. We also provide some specific circRNAs as examples to show their tissue-specific distribution and evaluate the possibility of applying circRNA technologies in molecular research and therapeutics.

摘要

近年来,环状RNA(circRNAs)作为一类以共价闭合环状结构为特征的新型RNA分子,已成为RNA生物学领域的一种新研究范式。许多circRNAs在真核生物中保守存在,定位于特定的亚细胞区室,并发挥不同的生物学作用。越来越多的证据表明,circRNAs通过充当微小RNA(miRNA)海绵、circRNA结合蛋白(cRBPs)的锚定物、转录调节因子、分子支架以及小蛋白/肽翻译的来源,来调节多种细胞过程。circRNAs生物学功能的出现为我们理解细胞生理学和疾病发病机制带来了新的视角。最近的研究表明,circRNAs的表达具有组织和细胞类型特异性,并在发育或疾病进展过程中受到特异性调控,在其中发挥特定的生物学功能。然而,其潜在机制在很大程度上仍不清楚。深入了解circRNAs的特异性表达是如何被调控以发挥特定生物学功能,将有助于在临床实践中把circRNA用作生物标志物,并开发新的治疗方法。本综述旨在总结circRNA生物合成、功能及分子机制方面的最新进展。我们还提供了一些特定的circRNAs作为实例,以展示它们的组织特异性分布,并评估在分子研究和治疗中应用circRNA技术的可能性。

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本文引用的文献

1
Promotion of tumor progression by exosome transmission of circular RNA circSKA3.环状RNA circSKA3通过外泌体传递促进肿瘤进展
Mol Ther Nucleic Acids. 2021 Dec 1;27:276-292. doi: 10.1016/j.omtn.2021.11.027. eCollection 2022 Mar 8.
2
exoRBase 2.0: an atlas of mRNA, lncRNA and circRNA in extracellular vesicles from human biofluids.exoRBase 2.0:人类生物体液外泌体中 mRNA、lncRNA 和 circRNA 的图谱。
Nucleic Acids Res. 2022 Jan 7;50(D1):D118-D128. doi: 10.1093/nar/gkab1085.
3
CircCD44 plays oncogenic roles in triple-negative breast cancer by modulating the miR-502-5p/KRAS and IGF2BP2/Myc axes.环状 RNA CD44 通过调节 miR-502-5p/KRAS 和 IGF2BP2/Myc 轴在三阴性乳腺癌中发挥致癌作用。
Mol Cancer. 2021 Oct 25;20(1):138. doi: 10.1186/s12943-021-01444-1.
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The Emerging Functions of Circular RNAs in Bladder Cancer.环状RNA在膀胱癌中的新兴功能
Cancers (Basel). 2021 Sep 15;13(18):4618. doi: 10.3390/cancers13184618.
5
Circular RNA ACTN4 promotes intrahepatic cholangiocarcinoma progression by recruiting YBX1 to initiate FZD7 transcription.环状 RNA ACTN4 通过募集 YBX1 启动 FZD7 转录促进肝内胆管癌进展。
J Hepatol. 2022 Jan;76(1):135-147. doi: 10.1016/j.jhep.2021.08.027. Epub 2021 Sep 9.
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Nuclear export and translation of circular repeat-containing intronic RNA in C9ORF72-ALS/FTD.C9ORF72-ALS/FTD 中含有环状重复的内含子 RNA 的核输出和翻译。
Nat Commun. 2021 Aug 13;12(1):4908. doi: 10.1038/s41467-021-25082-9.
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Circular RNA CircHIPK3 Promotes Homeostasis of the Intestinal Epithelium by Reducing MicroRNA 29b Function.环状 RNA CircHIPK3 通过降低 microRNA 29b 的功能促进肠道上皮细胞的稳态。
Gastroenterology. 2021 Oct;161(4):1303-1317.e3. doi: 10.1053/j.gastro.2021.05.060. Epub 2021 Jun 9.
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Targeting circular RNAs as a therapeutic approach: current strategies and challenges.靶向环状 RNA 作为一种治疗方法:当前的策略和挑战。
Signal Transduct Target Ther. 2021 May 21;6(1):185. doi: 10.1038/s41392-021-00569-5.
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Circular RNAs: Expression, localization, and therapeutic potentials.环状 RNA:表达、定位和治疗潜力。
Mol Ther. 2021 May 5;29(5):1683-1702. doi: 10.1016/j.ymthe.2021.01.018. Epub 2021 Jan 21.
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Identification of Circular RNA hsa_Circ_0003391 in Peripheral Blood Is Potentially Associated With Alzheimer's Disease.外周血中环状RNA hsa_Circ_0003391的鉴定可能与阿尔茨海默病相关。
Front Aging Neurosci. 2020 Dec 18;12:601965. doi: 10.3389/fnagi.2020.601965. eCollection 2020.