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通过核磁共振可视化核小体的构象集合

Visualizing Conformational Ensembles of the Nucleosome by NMR.

作者信息

Musselman Catherine A, Kutateladze Tatiana G

机构信息

Department of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045, United States.

Department of Pharmacology, University of Colorado School of Medicine, Aurora, Colorado 80045, United States.

出版信息

ACS Chem Biol. 2022 Mar 18;17(3):495-502. doi: 10.1021/acschembio.1c00954. Epub 2022 Feb 23.

DOI:10.1021/acschembio.1c00954
PMID:35196453
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9089449/
Abstract

The formation of chromatin not only compacts the eukaryotic genome into the nucleus but also provides a mechanism for the regulation of all DNA templated processes. Spatial and temporal modulation of the chromatin structure is critical in such regulation and involves fine-tuned functioning of the basic subunit of chromatin, the nucleosome. It has become apparent that the nucleosome is an inherently dynamic system, but characterization of these dynamics at the atomic level has remained challenging. NMR spectroscopy is a powerful tool for investigating the conformational ensemble and dynamics of proteins and protein complexes, and recent advances have made the study of large systems possible. Here, we review recent studies which utilize NMR spectroscopy to uncover the atomic level conformation and dynamics of the nucleosome and provide a better understanding of the importance of these dynamics in key regulatory events.

摘要

染色质的形成不仅将真核生物基因组压缩进细胞核,还为所有以DNA为模板的过程提供了一种调控机制。染色质结构的时空调节在这种调控中至关重要,并且涉及染色质基本亚基核小体的精细运作。很明显,核小体是一个内在的动态系统,但在原子水平上表征这些动态仍然具有挑战性。核磁共振波谱是研究蛋白质和蛋白质复合物的构象集合及动态的有力工具,最近的进展使研究大型系统成为可能。在这里,我们综述了最近利用核磁共振波谱揭示核小体原子水平构象和动态的研究,并更好地理解了这些动态在关键调控事件中的重要性。

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Structural and dynamic studies of chromatin by solid-state NMR spectroscopy.通过固态 NMR 光谱学研究染色质的结构和动态。
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Structural dynamics in chromatin unraveling by pioneer transcription factors.先驱转录因子解开染色质过程中的结构动力学

本文引用的文献

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Emerging Contributions of Solid-State NMR Spectroscopy to Chromatin Structural Biology.固态核磁共振波谱学对染色质结构生物学的新贡献。
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Binding of regulatory proteins to nucleosomes is modulated by dynamic histone tails.调节蛋白与核小体的结合受动态组蛋白尾部的调节。
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Histone H4 lysine 20 mono-methylation directly facilitates chromatin openness and promotes transcription of housekeeping genes.
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组蛋白 H4 赖氨酸 20 单甲基化直接促进染色质开放性,并促进管家基因的转录。
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