European Molecular Biology Laboratory Australia Node in Single Molecule Science, School of Medical Sciences, University of New South Wales, Sydney 2052, NSW, Australia;
Australian Research Council Centre of Excellence in Advanced Molecular Imaging, University of New South Wales, Sydney 2052, NSW, Australia.
Proc Natl Acad Sci U S A. 2022 Mar 1;119(9). doi: 10.1073/pnas.2116815119.
Protein-protein binding domains are critical in signaling networks. Src homology 2 (SH2) domains are binding domains that interact with sequences containing phosphorylated tyrosines. A subset of SH2 domain-containing proteins has tandem domains, which are thought to enhance binding affinity and specificity. However, a trade-off exists between long-lived binding and the ability to rapidly reverse signaling, which is a critical requirement of noise-filtering mechanisms such as kinetic proofreading. Here, we use modeling to show that the unbinding rate of tandem, but not single, SH2 domains can be accelerated by phosphatases. Using surface plasmon resonance, we show that the phosphatase CD45 can accelerate the unbinding rate of zeta chain-associated protein kinase 70 (ZAP70), a tandem SH2 domain-containing kinase, from biphosphorylated peptides from the T cell receptor (TCR). An important functional prediction of accelerated unbinding is that the intracellular ZAP70-TCR half-life in T cells will not be fixed but rather, dependent on the extracellular TCR-antigen half-life, and we show that this is the case in both cell lines and primary T cells. The work highlights that tandem SH2 domains can break the trade-off between signal fidelity (requiring long half-life) and signal reversibility (requiring short half-life), which is a key requirement for T cell antigen discrimination mediated by kinetic proofreading.
蛋白质-蛋白质结合域在信号网络中至关重要。Src 同源结构域 2 (SH2) 是与含有磷酸化酪氨酸的序列相互作用的结合域。含有 SH2 结构域的蛋白质亚基具有串联结构域,被认为可以增强结合亲和力和特异性。然而,在长寿命结合和快速逆转信号的能力之间存在权衡,这是动力学校验等噪声过滤机制的关键要求。在这里,我们使用建模表明,串联而非单个 SH2 结构域的解联速率可以被磷酸酶加速。使用表面等离子体共振,我们表明磷酸酶 CD45 可以加速 ζ 链相关蛋白激酶 70(ZAP70)的解联速率,ZAP70 是一种含有串联 SH2 结构域的激酶,从 T 细胞受体(TCR)的双磷酸化肽。解联速率加速的一个重要功能预测是,T 细胞中细胞内 ZAP70-TCR 的半衰期不会固定,而是取决于细胞外 TCR-抗原的半衰期,我们表明在细胞系和原代 T 细胞中都是如此。这项工作强调了串联 SH2 结构域可以打破信号保真度(需要长半衰期)和信号可逆性(需要短半衰期)之间的权衡,这是动力学校验介导的 T 细胞抗原识别的关键要求。