Spang Anja, Mahendrarajah Tara A, Offre Pierre, Stairs Courtney W
Department of Marine Microbiology and Biogeochemistry, NIOZ, Royal Netherlands Institute for Sea Research, Utrecht University, Den Burg, The Netherlands.
Department of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Genome Biol Evol. 2022 May 31;14(6). doi: 10.1093/gbe/evac034.
The tree of life (TOL) is a powerful framework to depict the evolutionary history of cellular organisms through time, from our microbial origins to the diversification of multicellular eukaryotes that shape the visible biosphere today. During the past decades, our perception of the TOL has fundamentally changed, in part, due to profound methodological advances, which allowed a more objective approach to studying organismal and viral diversity and led to the discovery of major new branches in the TOL as well as viral lineages. Phylogenetic and comparative genomics analyses of these data have, among others, revolutionized our understanding of the deep roots and diversity of microbial life, the origin of the eukaryotic cell, eukaryotic diversity, as well as the origin, and diversification of viruses. In this review, we provide an overview of some of the recent discoveries on the evolutionary history of cellular organisms and their viruses and discuss a variety of complementary techniques that we consider crucial for making further progress in our understanding of the TOL and its interconnection with the virosphere.
生命之树(TOL)是一个强大的框架,用于描绘细胞生物随时间推移的进化历史,从我们的微生物起源到塑造当今可见生物圈的多细胞真核生物的多样化。在过去几十年里,我们对生命之树的认知发生了根本性的变化,部分原因是方法上取得了重大进展,这使得我们能够以更客观的方式研究生物和病毒的多样性,并导致在生命之树中发现了主要的新分支以及病毒谱系。对这些数据进行的系统发育和比较基因组学分析,尤其彻底改变了我们对微生物生命的深层根源和多样性、真核细胞的起源、真核生物的多样性以及病毒的起源和多样化的理解。在这篇综述中,我们概述了一些关于细胞生物及其病毒进化历史的最新发现,并讨论了各种补充技术,我们认为这些技术对于在理解生命之树及其与病毒圈的相互联系方面取得进一步进展至关重要。