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关于核的起源:一个假说。

On the origin of the nucleus: a hypothesis.

机构信息

MRC Laboratory of Molecular Biology, Cambridge Biomedical Campus, Cambridge, United Kingdom.

Department of Marine Microbiology and Biogeochemistry, NIOZ, Royal Netherlands Institute for Sea Research, Den Burg, the Netherlands.

出版信息

Microbiol Mol Biol Rev. 2023 Dec 20;87(4):e0018621. doi: 10.1128/mmbr.00186-21. Epub 2023 Nov 29.

DOI:10.1128/mmbr.00186-21
PMID:38018971
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10732040/
Abstract

SUMMARYIn this hypothesis article, we explore the origin of the eukaryotic nucleus. In doing so, we first look afresh at the nature of this defining feature of the eukaryotic cell and its core functions-emphasizing the utility of seeing the eukaryotic nucleoplasm and cytoplasm as distinct regions of a common compartment. We then discuss recent progress in understanding the evolution of the eukaryotic cell from archaeal and bacterial ancestors, focusing on phylogenetic and experimental data which have revealed that many eukaryotic machines with nuclear activities have archaeal counterparts. In addition, we review the literature describing the cell biology of representatives of the TACK and Asgardarchaeaota - the closest known living archaeal relatives of eukaryotes. Finally, bringing these strands together, we propose a model for the archaeal origin of the nucleus that explains much of the current data, including predictions that can be used to put the model to the test.

摘要

摘要 在这篇假说文章中,我们探讨了真核细胞核的起源。在这样做的过程中,我们首先重新审视了真核细胞这一定义特征及其核心功能的本质——强调将真核核质和细胞质视为共同隔室的不同区域的实用性。然后,我们讨论了从古菌和细菌祖先理解真核细胞进化的最新进展,重点关注揭示具有核活性的许多真核机器具有古菌对应物的系统发育和实验数据。此外,我们还回顾了描述 TACK 和 Asgardarchaeaota 代表的细胞生物学的文献——它们是已知最接近真核生物的活体古菌。最后,将这些线索联系起来,我们提出了一个解释当前大部分数据的核的古菌起源模型,包括可以用来检验该模型的预测。

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本文引用的文献

1
ATP synthase evolution on a cross-braced dated tree of life.三磷酸腺苷合酶在一个有交叉支撑的生命之树 dated 树上的进化。
Nat Commun. 2023 Nov 17;14(1):7456. doi: 10.1038/s41467-023-42924-w.
2
Inference and reconstruction of the heimdallarchaeial ancestry of eukaryotes.真核生物 Heimdallarchaeia 祖先的推断和重建。
Nature. 2023 Jun;618(7967):992-999. doi: 10.1038/s41586-023-06186-2. Epub 2023 Jun 14.
3
The virome of the last eukaryotic common ancestor and eukaryogenesis.真核生物最后共同祖先的病毒组与真核生物起源。
Nat Microbiol. 2023 Jun;8(6):1008-1017. doi: 10.1038/s41564-023-01378-y. Epub 2023 May 1.
4
Ultrastructural and proteomic evidence for the presence of a putative nucleolus in an Archaeon.古生菌中存在假定核仁的超微结构和蛋白质组学证据。
Front Microbiol. 2023 Feb 2;14:1075071. doi: 10.3389/fmicb.2023.1075071. eCollection 2023.
5
Archaea/eukaryote-specific ribosomal proteins - guardians of a complex structure.古菌/真核生物特异性核糖体蛋白——复杂结构的守护者
Comput Struct Biotechnol J. 2023 Jan 27;21:1249-1261. doi: 10.1016/j.csbj.2023.01.037. eCollection 2023.
6
Bacterial origins of thymidylate metabolism in Asgard archaea and Eukarya.古菌 Asgard 和真核生物中胸苷酸代谢的细菌起源。
Nat Commun. 2023 Feb 15;14(1):838. doi: 10.1038/s41467-023-36487-z.
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Integrating Phylogenetics With Intron Positions Illuminates the Origin of the Complex Spliceosome.将系统发生与内含子位置相结合揭示了复杂剪接体的起源。
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A quantitative map of nuclear pore assembly reveals two distinct mechanisms.核孔组装的定量图谱揭示了两种不同的机制。
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Actin cytoskeleton and complex cell architecture in an Asgard archaeon.Asgard 古菌中的肌动蛋白细胞骨架和复杂的细胞结构
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