Sime Darby Plantation Technology Centre Sdn. Bhd, 43400, Serdang, Selangor, Malaysia.
Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia (UPM), 43400, Serdang, Selangor, Malaysia.
BMC Genomics. 2022 Feb 26;23(1):164. doi: 10.1186/s12864-022-08378-y.
The ability of plants to withstand and thrive in an adverse environment is crucial to ensure their survivability and yield performance. The WRKY transcription factors (TFs) have crucial roles in plant growth, development and stress response, particularly drought stress. In oil palm, drought is recognized as one of the major yield limiting factors. However, the roles of WRKY TFs in the drought response of oil palm is unclear.
Herein, we studied the transcriptome of drought treated oil palm leaf and identified 40 differentially expressed genes (DEGs) of WRKY TFs, of which 32 DEGs were upregulated and 8 DEGs were downregulated in response to drought stress in oil palm. They were categorized into Groups I to IV based on the numbers of WRKY domain and the structural difference in the zinc finger domain. Multiple stress- and hormone-responsive cis-regulatory elements were detected in the drought responsive oil palm EgWRKY (Dro-EgWRKY) genes. Fourteen of the 15 selected oil palm WRKY (EgWRKY) genes demonstrated a tissue-specific expression profile except for EgWRKY28 (Group I), which was expressed in all tissues tested. The expression levels of 15 candidate EgWRKYs were upregulated upon salinity and heat treatments, while several genes were also inducible by abscisic acid, methyl jasmonate, salicylic acid and hydrogen peroxide treatments. Members of the Group III WRKY TFs including EgWRKY07, 26, 40, 52, 59, 73 and 81 displayed multiple roles in drought- and salinity-response under the modulation of phytohormones.
EgWRKY TFs of oil palm are involved in phytohormones and abiotic stress responses including drought, salinity and heat. EgWRKY07, 26, 59 and 81 from Group III maybe important regulators in modulating responses of different abiotic stresses. Further functional analysis is required to understand the underlying mechanism of WRKY TFs in the regulatory network of drought stress.
植物在逆境中生存和茁壮成长的能力对于确保其生存能力和产量表现至关重要。WRKY 转录因子(TFs)在植物生长、发育和应激反应中起着至关重要的作用,特别是在干旱胁迫方面。在油棕中,干旱被认为是主要的产量限制因素之一。然而,WRKY TFs 在油棕干旱响应中的作用尚不清楚。
本文研究了干旱处理的油棕叶片的转录组,鉴定了 40 个差异表达的 WRKY TFs 基因,其中 32 个基因在油棕响应干旱胁迫时上调表达,8 个基因下调表达。根据 WRKY 结构域的数量和锌指结构域的结构差异,将它们分为 I 至 IV 组。在干旱响应的油棕 EgWRKY(Dro-EgWRKY)基因中检测到多个胁迫和激素响应的顺式调控元件。在 15 个选定的油棕 WRKY(EgWRKY)基因中,除了 EgWRKY28(I 组)外,其余基因在所有测试的组织中都表现出组织特异性表达模式。15 个候选 EgWRKY 基因的表达水平在盐胁迫和热胁迫处理后上调,而一些基因也可被脱落酸、茉莉酸甲酯、水杨酸和过氧化氢诱导。III 组的 WRKY TF 成员包括 EgWRKY07、26、40、52、59、73 和 81,在植物激素的调节下,在干旱和盐胁迫反应中表现出多种作用。
油棕的 EgWRKY TFs 参与了植物激素和非生物胁迫反应,包括干旱、盐度和热胁迫。III 组的 EgWRKY07、26、59 和 81 可能是调节不同非生物胁迫反应的重要调节剂。需要进一步的功能分析来了解 WRKY TFs 在干旱胁迫调控网络中的作用机制。