Chen Kaijie, Shen Dongjie, Tan Lin, Lai Donglin, Han Yuru, Gu Yonggang, Lu Changlian, Gu Xuefeng
Shanghai Key Laboratory of Molecular Imaging, Zhoupu Hospital, Shanghai University of Medicine and Health Sciences, Shanghai, China.
School of Health Science and Engineering, University of Shanghai for Science and Technology, Shanghai, China.
Front Genet. 2022 Feb 11;13:822261. doi: 10.3389/fgene.2022.822261. eCollection 2022.
Recent studies have identified a role for ALKBH7 in the occurrence and progression of cancer, and this protein is related to cellular immunity and immune cell infiltration. However, the prognostic and immunotherapeutic value of ALKBH7 in different cancers have not been explored. In this study, we observed high ALKBH7 expression in 17 cancers and low expression in 5 cancers compared to paired normal tissues. Although ALKBH7 expression did not correlate relatively significantly with the clinical parameters of age (6/33), sex (3/33) and stage (3/27) in the cancers studied, the results of the survival analysis reflect the pan-cancer prognostic value of ALKBH7. In addition, ALKBH7 expression was significantly correlated with the TMB (7/33), MSI (13/33), mDNAsi (12/33) and mRNAsi (13/33) in human cancers. Moreover, ALKBH7 expression was associated and predominantly negatively correlated with the expression of immune checkpoint (ICP) genes in many cancers. Furthermore, ALKBH7 correlated with infiltrating immune cells and ESTIMATE scores, especially in PAAD, PRAD and THCA. Finally, the ALKBH7 gene coexpression network is involved in the regulation of cellular immune, oxidative, phosphorylation, and metabolic pathways. In conclusion, ALKBH7 may serve as a potential prognostic pan-cancer biomarker and is involved in the immune response. Our pan-cancer analysis provides insight into the role of ALKBH7 in different cancers.
最近的研究已经确定了ALKBH7在癌症发生和发展中的作用,并且这种蛋白质与细胞免疫和免疫细胞浸润有关。然而,ALKBH7在不同癌症中的预后和免疫治疗价值尚未得到探索。在本研究中,我们观察到与配对的正常组织相比,17种癌症中ALKBH7表达高,5种癌症中表达低。尽管在所研究的癌症中,ALKBH7表达与年龄(6/33)、性别(3/33)和分期(3/27)的临床参数相关性相对不显著,但生存分析结果反映了ALKBH7的泛癌预后价值。此外,ALKBH7表达与人类癌症中的肿瘤突变负荷(TMB,7/33)、微卫星高度不稳定(MSI,13/33)、线粒体DNA拷贝数改变(mDNAsi,12/33)和mRNA表达改变(mRNAsi,13/33)显著相关。此外,在许多癌症中,ALKBH7表达与免疫检查点(ICP)基因的表达相关,且主要呈负相关。此外,ALKBH7与浸润性免疫细胞和ESTIMATE评分相关,尤其是在胰腺癌(PAAD)、前列腺癌(PRAD)和甲状腺癌(THCA)中。最后,ALKBH7基因共表达网络参与细胞免疫、氧化、磷酸化和代谢途径的调节。总之,ALKBH7可能作为一种潜在的泛癌预后生物标志物,并参与免疫反应。我们的泛癌分析为了解ALKBH7在不同癌症中的作用提供了线索。