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无需DNA供体即可高效靶向插入大DNA片段。

Efficient targeted insertion of large DNA fragments without DNA donors.

作者信息

Wang Jinlin, He Zhou, Wang Guoquan, Zhang Ruiwen, Duan Junyi, Gao Pan, Lei Xinlin, Qiu Houyuan, Zhang Chuanping, Zhang Ying, Yin Hao

机构信息

Department of Urology, Frontier Science Center for Immunology and Metabolism, Medical Research Institute, Zhongnan Hospital of Wuhan University, Wuhan University, Wuhan, China.

Department of Pulmonary and Critical Care Medicine, Zhongnan Hospital of Wuhan University, Wuhan, China.

出版信息

Nat Methods. 2022 Mar;19(3):331-340. doi: 10.1038/s41592-022-01399-1. Epub 2022 Feb 28.

Abstract

Targeted insertion of large DNA fragments holds great potential for treating genetic diseases. Prime editors can effectively insert short fragments (~44 bp) but not large ones. Here we developed GRAND editing to precisely insert large DNA fragments without DNA donors. In contrast to prime editors, which require reverse transcription templates hybridizing with the target sequence, GRAND editing employs a pair of prime editing guide RNAs, with reverse transcription templates nonhomologous to the target site but complementary to each other. This strategy exhibited an efficiency of up to 63.0% of a 150-bp insertion with minor by-products and 28.4% of a 250-bp insertion. It allowed insertions up to ~1 kb, although the efficiency remains low for fragments larger than 400 bp. We confirmed efficient insertion in multiple genomic loci of several cell lines and non-dividing cells, which expands the scope of genome editing to enable donor-free insertion of large DNA sequences.

摘要

靶向插入大的DNA片段在治疗遗传疾病方面具有巨大潜力。碱基编辑器能够有效地插入短片段(约44bp),但无法插入大片段。在此,我们开发了GRAND编辑技术,可在无需DNA供体的情况下精确插入大的DNA片段。与需要与靶序列杂交的逆转录模板的碱基编辑器不同,GRAND编辑采用一对碱基编辑引导RNA,其逆转录模板与靶位点非同源但彼此互补。该策略对150bp插入的效率高达63.0%,副产物较少,对250bp插入的效率为28.4%。它能够实现长达约1kb的插入,尽管对于大于400bp的片段效率仍然较低。我们在多个细胞系和非分裂细胞的多个基因组位点证实了高效插入,这扩展了基因组编辑的范围,能够实现无供体的大DNA序列插入。

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