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肝细胞癌免疫相关lncRNA对临床预后模型构建

Immune-Related lncRNA Pairs Clinical Prognosis Model Construction for Hepatocellular Carcinoma.

作者信息

Zhu Yinghui, Shan Dezhi, Guo Lianyi, Chen Shujia, Li Xiaofei

机构信息

Department of Digestology, The First Affiliated Hospital of Jinzhou Medical University, Jinzhou, People's Republic of China.

Graduate School of Peking Union Medical College, Beijing, People's Republic of China.

出版信息

Int J Gen Med. 2022 Feb 22;15:1919-1931. doi: 10.2147/IJGM.S343350. eCollection 2022.

Abstract

BACKGROUND

Long non-coding RNA (lncRNA) plays an essential regulatory role in the occurrence and development of hepatocellular carcinoma (HCC). This paper aims to establish an immune-related lncRNA (irlncRNA) pairs model independent of expression level for risk assessment and prognosis prediction of HCC.

METHODS

Transcriptome data and corresponding clinical data were downloaded from TCGA. HCC patients were randomly divided into training group and test group. Univariate Cox regression analysis, LASSO regression analysis, and stepwise multiple Cox regression analysis were used to establish a prognostic model. The prediction ability of the model was verified by ROC curves. Next, the patients were divided into low-risk and high-risk groups. We compared the differences between the two groups in survival rate, clinicopathological characteristics, tumor immune cell infiltration status, chemotherapeutic drug sensitivity and immunosuppressive molecules.

RESULTS

A prognosis prediction model was established based on 7 irlncRNA pairs, namely irlncRNA pairs (IRLP). ROC curves of the training group and test group showed that the IRLP model had high sensitivity and specificity for survival prediction. Kaplan-Meier analysis showed that the survival rate of the high-risk group was significantly lower than that of the low-risk group. Immune cell infiltration analysis showed that the high-risk group was significantly correlated with various immune cell infiltration. Finally, there were statistically significant differences in chemosensitivity and molecular marker expression between the two groups.

CONCLUSION

The prognosis prediction model established by irlncRNA pairs has a certain guiding significance for the prognosis prediction of HCC. It may provide valuable clinical applications in antitumor immunotherapy.

摘要

背景

长链非编码RNA(lncRNA)在肝细胞癌(HCC)的发生发展中起重要调节作用。本文旨在建立一种独立于表达水平的免疫相关lncRNA(irlncRNA)对模型,用于HCC的风险评估和预后预测。

方法

从TCGA下载转录组数据和相应的临床数据。HCC患者被随机分为训练组和测试组。采用单因素Cox回归分析、LASSO回归分析和逐步多元Cox回归分析建立预后模型。通过ROC曲线验证模型的预测能力。接下来,将患者分为低风险组和高风险组。我们比较了两组在生存率、临床病理特征、肿瘤免疫细胞浸润状态、化疗药物敏感性和免疫抑制分子方面的差异。

结果

基于7对irlncRNA建立了预后预测模型,即irlncRNA对(IRLP)。训练组和测试组的ROC曲线显示,IRLP模型对生存预测具有高敏感性和特异性。Kaplan-Meier分析表明,高风险组的生存率显著低于低风险组。免疫细胞浸润分析表明,高风险组与各种免疫细胞浸润显著相关。最后,两组在化疗敏感性和分子标志物表达方面存在统计学显著差异。

结论

irlncRNA对建立的预后预测模型对HCC的预后预测具有一定的指导意义。它可能在抗肿瘤免疫治疗中提供有价值的临床应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e70d/8882675/93276f8b3e9f/IJGM-15-1919-g0001.jpg

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