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非磷酸化甘油醛-3-磷酸脱氢酶GapN是……中的一个潜在新药物靶点。

The Non-phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase GapN Is a Potential New Drug Target in .

作者信息

Eisenberg Philip, Albert Leon, Teuffel Jonathan, Zitzow Eric, Michaelis Claudia, Jarick Jane, Sehlke Clemens, Große Lisa, Bader Nicole, Nunes-Alves Ariane, Kreikemeyer Bernd, Schindelin Hermann, Wade Rebecca C, Fiedler Tomas

机构信息

Institute of Medical Microbiology, Virology, and Hygiene, Rostock University Medical Centre, Rostock, Germany.

Rudolf Virchow Center for Integrative and Translational Bioimaging, University of Würzburg, Würzburg, Germany.

出版信息

Front Microbiol. 2022 Feb 15;13:802427. doi: 10.3389/fmicb.2022.802427. eCollection 2022.

Abstract

The strict human pathogen causes infections of varying severity, ranging from self-limiting suppurative infections to life-threatening diseases like necrotizing fasciitis or streptococcal toxic shock syndrome. Here, we show that the non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN is an essential enzyme for . GapN converts glyceraldehyde 3-phosphate into 3-phosphoglycerate coupled to the reduction of NADP to NADPH. The knock-down of by antisense peptide nucleic acids (asPNA) significantly reduces viable bacterial counts of laboratory and macrolide-resistant clinical strains . As lacks the oxidative part of the pentose phosphate pathway, GapN appears to be the major NADPH source for the bacterium. Accordingly, other streptococci that carry a complete pentose phosphate pathway are not prone to asPNA-based knock-down. Determination of the crystal structure of the GapN apo-enzyme revealed an unusual cis-peptide in proximity to the catalytic binding site. Furthermore, using a structural modeling approach, we correctly predicted competitive inhibition of GapN by erythrose 4-phosphate, indicating that our structural model can be used for screening of specific GapN inhibitors. In conclusion, the data provided here reveal that GapN is a potential target for antimicrobial substances that selectively kill and other streptococci that lack the oxidative part of the pentose phosphate pathway.

摘要

这种严格的人类病原体可引起从自限性化脓性感染到危及生命的疾病,如坏死性筋膜炎或链球菌中毒性休克综合征等不同严重程度的感染。在此,我们表明非磷酸化甘油醛-3-磷酸脱氢酶GapN是……的一种必需酶。GapN将甘油醛3-磷酸转化为3-磷酸甘油酸,并伴随着NADP还原为NADPH。用反义肽核酸(asPNA)敲低……可显著降低……实验室菌株和耐大环内酯类临床菌株的活菌数。由于……缺乏磷酸戊糖途径的氧化部分,GapN似乎是该细菌的主要NADPH来源。因此,其他具有完整磷酸戊糖途径的链球菌不易受到基于asPNA的……敲低的影响。……GapN无辅基酶晶体结构的测定揭示了催化结合位点附近有一个不寻常的顺式肽。此外,使用结构建模方法,我们正确预测了4-磷酸赤藓糖对GapN的竞争性抑制,表明我们的结构模型可用于筛选特定的GapN抑制剂。总之,这里提供的数据表明,GapN是选择性杀死……和其他缺乏磷酸戊糖途径氧化部分的链球菌的抗菌物质的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4138/8886048/60f404b1c8c8/fmicb-13-802427-g001.jpg

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