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穿孔鲍(多毛纲,矶沙蚕科)的完整线粒体基因组。

Complete mitochondrial genome of the abalone shell-boring (Polychaeta, Spionidae).

作者信息

Lee Soon Jeong, Lee Sang-Rae

机构信息

Aquatic Disease Control Division, National Fishery Products Quality Management Service (NFQS), Busan, Korea.

Marine Research Institute, Pusan National University, Busan, Korea.

出版信息

Mitochondrial DNA B Resour. 2022 Mar 2;7(3):438-439. doi: 10.1080/23802359.2022.2047116. eCollection 2022.

DOI:10.1080/23802359.2022.2047116
PMID:35252579
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8896192/
Abstract

Claparede 1868 (Polychaeta, Spionidae) is a mollusk shell-boring species which has been reported as a harmful species. In the present study, we sequenced and reported the mitochondrial genome (mitogenome) of from Korea. Its mitogenome was determined by long range PCR and primer walking. The mitogenome was found to be 17,707 bp in length and contained two ribosomal RNAs (rRNAs), 23 transfer RNAs (tRNAs), and 12 protein-coding genes which showed different gene arrangement with that in related mitogenomes of species of Sedentaria (Annelida). Interestingly, the 8 gene was not found in the mitogenome of , whereas it is present in the mitogenomes of related species and . Moreover, 2 (3' end) and 1 (5' end) genes overlapped in 23 bases. The mitogenome structure and gene contents of provide useful information on the evolution and phylogenetic relationship among polychaete species.

摘要

克拉帕雷德1868年(多毛纲,海稚虫科)是一种蛀食软体动物贝壳的物种,已被报道为有害物种。在本研究中,我们对来自韩国的[该物种名称未给出]进行了线粒体基因组(线粒体基因组)测序并进行了报道。其线粒体基因组通过长片段PCR和引物步移法确定。发现该线粒体基因组长度为17707 bp,包含两个核糖体RNA(rRNA)、23个转运RNA(tRNA)和12个蛋白质编码基因,其基因排列与定居亚纲(环节动物门)相关物种的线粒体基因组不同。有趣的是,在[该物种名称未给出]的线粒体基因组中未发现8基因,而在相关物种[物种名称未给出]和[物种名称未给出]的线粒体基因组中存在该基因。此外,2个基因(3'端)和1个基因(5'端)在23个碱基处重叠。[该物种名称未给出]的线粒体基因组结构和基因内容为多毛类物种的进化和系统发育关系提供了有用信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5623/8896192/103d4ba55d16/TMDN_A_2047116_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5623/8896192/103d4ba55d16/TMDN_A_2047116_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5623/8896192/103d4ba55d16/TMDN_A_2047116_F0001_B.jpg

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本文引用的文献

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Mitochondrial genome of the Christmas tree worm Spirobranchus giganteus (Annelida: Serpulidae) reveals a high substitution rate among annelids.圣诞树蠕虫(Spirobranchus giganteus,环节动物门:龙介虫科)的线粒体基因组揭示了环节动物之间的高替换率。
Gene. 2017 Mar 20;605:43-53. doi: 10.1016/j.gene.2016.12.024. Epub 2016 Dec 26.
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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.
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Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
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Phylogenetic information from three mitochondrial genomes of Terebelliformia (Annelida) worms and duplication of the methionine tRNA.来自缨鳃虫目(环节动物)蠕虫三个线粒体基因组的系统发育信息及甲硫氨酸tRNA的重复
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