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机器学习方法在科学生物医学文献中识别不良事件。

Machine learning approach to identify adverse events in scientific biomedical literature.

机构信息

Scientific & Competitive Intelligence, Bayer AG, Wuppertal, Germany.

Averbis GmbH, Freiburg, Germany.

出版信息

Clin Transl Sci. 2022 Jun;15(6):1500-1506. doi: 10.1111/cts.13268. Epub 2022 Apr 3.

DOI:10.1111/cts.13268
PMID:35266644
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9199879/
Abstract

Monitoring the occurrence of adverse events in the scientific literature is a mandatory process in drug marketing surveillance. This is a very time-consuming and complex task to fulfill the compliance and, most importantly, to ensure patient safety. Therefore, a machine learning (ML) algorithm has been trained to support this manual intellectual review process, by automatically providing a classification of the literature articles into two types. An algorithm has been designed to automatically classify "relevant articles" which are reporting any kind of drug safety relevant information, and those which are not reporting an adverse drug reaction as "not relevant." The review process is consisted of many rules and aspects which needed to be taken into consideration. Therefore, for the training of the algorithm, thousands of documents from previous screenings have been used. After several iterations of adjustments and fine tuning, the ML approach is definitively a great achievement in pre-sorting the articles into "relevant" and "non-relevant" and supporting the intellectual review process.

摘要

监测科学文献中不良反应的发生是药物上市后监测的强制性程序。为了满足合规要求,最重要的是为了确保患者安全,这是一项非常耗时且复杂的任务。因此,已经训练了一种机器学习 (ML) 算法来支持这个手动的知识审查过程,通过自动对文献文章进行分类,将其分为两种类型。该算法旨在自动对“相关文章”进行分类,这些文章报告任何与药物安全相关的信息,而那些未报告药物不良反应的文章则归类为“不相关”。审查过程涉及许多需要考虑的规则和方面。因此,在算法的训练中,使用了数千篇来自以前筛选的文档。经过几次调整和微调,机器学习方法无疑在将文章预先分类为“相关”和“不相关”以及支持知识审查过程方面取得了重大进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/3bd7148383b0/CTS-15-1500-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/9165633c7df3/CTS-15-1500-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/c935a4c2a1f6/CTS-15-1500-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/ed2714e88c04/CTS-15-1500-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/3bd7148383b0/CTS-15-1500-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/9165633c7df3/CTS-15-1500-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/c935a4c2a1f6/CTS-15-1500-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/ed2714e88c04/CTS-15-1500-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8887/9199879/3bd7148383b0/CTS-15-1500-g004.jpg

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本文引用的文献

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Materials (Basel). 2016 Jun 29;9(7):531. doi: 10.3390/ma9070531.