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对恶性黑色素瘤染色质结构和组蛋白甲基化的影响。

Impact of on chromatin structure and histone methylation in malignant melanoma.

机构信息

Institute of Biochemistry, Friedrich‑Alexander‑University Erlangen‑Nürnberg, D‑91054 Erlangen, Germany.

Faculty of Computer Science, Deggendorf Institute of Technology, D‑94469 Deggendorf, Germany.

出版信息

Int J Mol Med. 2022 May;49(5). doi: 10.3892/ijmm.2022.5122. Epub 2022 Mar 16.

Abstract

The tumor suppressive role of CYLD lysine 63 deubiquitinase () is known in melanoma. To the best of our knowledge, however, the precise mechanism underlying the tumor suppressive function of has yet to be clarified. In the present study, a novel melanoma mouse model was generated, which revealed accelerated tumor growth in ‑knockout () compared with ‑wild‑type () mice. To determine the underlying molecular mechanism, mutation analysis of primary tumor‑derived cell lines from and mice was performed using RNA sequencing data. Variant calling revealed no common mutations in compared with cells. Thus, the epigenetic processes influencing development and progression of melanoma were investigated. Initial analysis of expression pattern of known hypermethylated genes in melanoma (suppressor of cytokine signalling, methylthioadenosine phosphorylase, cadherin 1) in the presence or absence of 5'‑Aza‑deoxyctidine treatment revealed that does not play a key role in DNA methylation. Chromatin accessibility and histone H3 modification assay uncovered a role of in the formation of chromatin structure. Subsequent inhibitor experiments confirmed the effect of CYLD on H3K9me2 level associated with heterochromatin. Furthermore, enhanced H3K9 dimethylation in melanoma cells was associated with upregulation of euchromatic histone lysine methyltransferase 2 (EHMT2). Moreover, the specific inhibitor of EHMT2, , resulted in decreased proliferation and relaxation of compact chromatin in ‑deficient melanoma cells. These results reveal a novel role of in histone methylation and chromatin packaging.

摘要

CYLD 赖氨酸 63 去泛素化酶 () 在黑色素瘤中具有肿瘤抑制作用。据我们所知, 发挥肿瘤抑制功能的确切机制尚未阐明。在本研究中,构建了一种新型黑色素瘤小鼠模型,与野生型 () 相比, -敲除 () 小鼠的肿瘤生长速度加快。为了确定潜在的分子机制,对 和 小鼠的原发性肿瘤衍生细胞系进行了 RNA 测序数据的突变分析。变异分析显示与 细胞相比, 中没有共同的突变。因此,研究了影响黑色素瘤发生和进展的表观遗传过程。在存在或不存在 5'‑Aza‑deoxyctidine 处理的情况下,对已知高甲基化基因 (细胞因子信号转导抑制因子、甲基硫腺苷磷酸化酶、钙粘蛋白 1) 在黑色素瘤中的表达模式进行了初步分析,结果表明 不参与 DNA 甲基化。染色质可及性和组蛋白 H3 修饰分析揭示了 在染色质结构形成中的作用。随后的抑制剂实验证实了 CYLD 对与异染色质相关的 H3K9me2 水平的影响。此外, 黑色素瘤细胞中 H3K9 二甲基化增强与 euchromatic histone lysine methyltransferase 2 (EHMT2) 的上调有关。此外,EHMT2 的特异性抑制剂 ,导致 -缺陷黑色素瘤细胞中增殖减少和紧凑染色质松弛。这些结果揭示了 参与组蛋白甲基化和染色质包装的新作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db26/8973957/6de134e8b00a/IJMM-49-05-05122-g00.jpg

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