Dipartimento di Scienza dei Materiali, Università di Milano Bicocca, Via Cozzi 55, 20125 Milano, Italy.
Nanoscale. 2022 Mar 31;14(13):5121-5137. doi: 10.1039/d1nr07647g.
Inorganic nanoparticles (NPs) are gaining increasing attention in nanomedicine because of their stimuli responsiveness, which allows combining therapy with diagnosis. However, little information is known about their interaction with intracellular or plasma proteins when they are introduced in a biological environment. Here we present atomistic molecular dynamics (MD) simulations investigating the case study of dopamine-functionalized TiO nanoparticles and two proteins that are overexpressed in cancer cells, PARP1 and HSP90, since experiments proved them to be the main components of the corona in cell cultures. The mechanism and the nature of the interaction (electrostatic, van der Waals, H-bonds, .) is unravelled by defining the protein residues that are more frequently in contact with the NPs, the extent of contact surface area and the variations in the protein secondary structures, at different pH and ionic strength conditions of the solution where they are immersed to simulate a realistic biological environment. The effects of the NP surface functionalization and charge are also considered. Our MD results suggest that less acidic intracellular pH conditions in the presence of cytosolic ionic strength enhance PARP1 interaction with the nanoparticle, whereas the HSP90 contribution is partly weakened, providing a rational explanation to existing experimental observations.
无机纳米粒子(NPs)由于其刺激响应性而在纳米医学中受到越来越多的关注,因为它可以将治疗与诊断结合起来。然而,当它们被引入生物环境时,人们对它们与细胞内或血浆蛋白的相互作用知之甚少。在这里,我们通过原子分子动力学(MD)模拟研究了多巴胺功能化 TiO2 NPs 与两种在癌细胞中过度表达的蛋白质(PARP1 和 HSP90)的案例研究,因为实验证明它们是细胞培养物中冠状物的主要成分。通过定义与 NPs 接触更频繁的蛋白质残基、接触表面积的程度以及蛋白质二级结构的变化,可以揭示相互作用的机制和性质(静电、范德华力、氢键等),同时考虑不同 pH 值和离子强度条件下的溶液,以模拟真实的生物环境。还考虑了 NP 表面功能化和电荷的影响。我们的 MD 结果表明,在存在细胞溶质离子强度的情况下,较低的细胞内 pH 值条件会增强 PARP1 与纳米颗粒的相互作用,而 HSP90 的贡献部分减弱,为现有实验观察提供了合理的解释。