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微通道中的群体遗传学。

Population genetics in microchannels.

作者信息

Koldaeva Anzhelika, Tsai Hsieh-Fu, Shen Amy Q, Pigolotti Simone

机构信息

Biological Complexity Unit, Okinawa Institute of Science and Technology and Graduate University, Okinawa 904-0495, Japan.

Micro/Bio/Nanofluidics Unit, Okinawa Institute of Science and Technology and Graduate University, Okinawa 904-0495, Japan.

出版信息

Proc Natl Acad Sci U S A. 2022 Mar 22;119(12):e2120821119. doi: 10.1073/pnas.2120821119. Epub 2022 Mar 18.

Abstract

SignificanceMany microbial populations proliferate in small channels. In such environments, reproducing cells organize in parallel lanes. Reproducing cells shift these lanes, potentially expelling other cells from the channel. In this paper, we combine theory and experiments to understand how these dynamics affects the diversity of a microbial population. We theoretically predict that genetic diversity is quickly lost along lanes of cells. Our experiments confirm that a population of proliferating in a microchannel organizes into lanes of genetically identical cells within a few generations. Our findings elucidate the effect of lane formation on populations evolution, with potential applications ranging from microbial ecology in soil to dynamics of epithelial tissues in higher organisms.

摘要

意义

许多微生物群体在小通道中增殖。在这样的环境中,正在繁殖的细胞会排列成平行的条带。正在繁殖的细胞会移动这些条带,有可能将其他细胞从通道中排挤出去。在本文中,我们结合理论和实验来理解这些动态过程如何影响微生物群体的多样性。我们从理论上预测,遗传多样性会沿着细胞条带迅速丧失。我们的实验证实,在微通道中增殖的群体在几代之内就会组织成基因相同的细胞条带。我们的发现阐明了条带形成对群体进化的影响,其潜在应用范围从土壤中的微生物生态到高等生物上皮组织的动态过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/922a/8944277/d785d01bf1f6/pnas.2120821119fig01.jpg

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