Pedley Anthony M, Boylan Jack P, Chan Chung Yu, Kennedy Erin L, Kyoung Minjoung, Benkovic Stephen J
Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania, USA.
Department of Chemistry and Biochemistry, University of Maryland Baltimore County, Baltimore, Maryland, USA.
J Biol Chem. 2022 May;298(5):101845. doi: 10.1016/j.jbc.2022.101845. Epub 2022 Mar 18.
Enzymes within the de novo purine biosynthetic pathway spatially organize into dynamic intracellular assemblies called purinosomes. The formation of purinosomes has been correlated with growth conditions resulting in high purine demand, and therefore, the cellular advantage of complexation has been hypothesized to enhance metabolite flux through the pathway. However, the properties of this cellular structure are unclear. Here, we define the purinosome in a transient expression system as a biomolecular condensate using fluorescence microscopy. We show that purinosomes, as denoted by formylglycinamidine ribonucleotide synthase granules in purine-depleted HeLa cells, are spherical and appear to coalesce when two come into contact, all liquid-like characteristics that are consistent with previously reported condensates. We further explored the biophysical and biochemical means that drive the liquid-liquid phase separation of these structures. We found that the process of enzyme condensation into purinosomes is likely driven by the oligomeric state of the pathway enzymes and not a result of intrinsic disorder, the presence of low-complexity domains, the assistance of RNA scaffolds, or changes in intracellular pH. Finally, we demonstrate that the heat shock protein 90 KDa helps to regulate the physical properties of the condensate and maintain their liquid-like state inside HeLa cells. We show that disruption of heat shock protein 90 KDa activity induced the transformation of formylglycinamidine ribonucleotide synthase clusters into more irregularly shaped condensates, suggesting that its chaperone activity is essential for purinosomes to retain their liquid-like properties. This refined view of the purinosome offers new insight into how metabolic enzymes spatially organize into dynamic condensates within human cells.
从头嘌呤生物合成途径中的酶在空间上组织成称为嘌呤体的动态细胞内聚集体。嘌呤体的形成与导致高嘌呤需求的生长条件相关,因此,有人推测复合物的细胞优势在于增强代谢物通过该途径的通量。然而,这种细胞结构的特性尚不清楚。在这里,我们使用荧光显微镜在瞬时表达系统中将嘌呤体定义为生物分子凝聚物。我们表明,在嘌呤耗尽的HeLa细胞中,由甲酰甘氨脒核糖核苷酸合酶颗粒表示的嘌呤体是球形的,并且当两个接触时似乎会合并,所有这些都具有与先前报道的凝聚物一致的类液体特征。我们进一步探索了驱动这些结构发生液-液相分离的生物物理和生化手段。我们发现,酶凝聚成嘌呤体的过程可能是由该途径酶的寡聚状态驱动的,而不是由内在无序、低复杂性结构域的存在、RNA支架的辅助或细胞内pH值的变化导致的。最后,我们证明热休克蛋白90 kDa有助于调节凝聚物的物理性质并维持其在HeLa细胞内的类液体状态。我们表明,热休克蛋白90 kDa活性的破坏会导致甲酰甘氨脒核糖核苷酸合酶簇转变为形状更不规则的凝聚物,这表明其伴侣活性对于嘌呤体保持其类液体性质至关重要。对嘌呤体的这种精确认识为代谢酶如何在人类细胞内空间组织成动态凝聚物提供了新的见解。