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基于163的全基因组转录组测序,四环素类调控因子Lp_2642正向调控植物乳杆菌素EF的产生

TetR-Type Regulator Lp_2642 Positively Regulates Plantaricin EF Production Based on Genome-Wide Transcriptome Sequencing of 163.

作者信息

Zhao Deyin, Wang Qian, Meng Fanqiang, Lu Fengxia, Bie Xiaomei, Lu Zhaoxin, Lu Yingjian

机构信息

College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.

College of Food Science & Engineering, Nanjing University of Finance and Economics, Nanjing 210023, China.

出版信息

J Agric Food Chem. 2022 Apr 13;70(14):4362-4372. doi: 10.1021/acs.jafc.2c00206. Epub 2022 Mar 21.

Abstract

Whole-genome and transcriptome sequences of 163 are provided. There was one circular chromosome and four circular plasmids, with sizes of 3,131,367; 56,674; 49,140; 43,628; and 36,387 bp, respectively, in 163. The regulator Lp_2642 was selected from the genome data, the overexpression of which increased the transcriptional levels of related genes in plantaricin EF biosynthesis and enhanced plantaricin EF production. Its production was 17.30 mg/L in 163 (Lp_2642), which was 1.29-fold higher than that of the original strain. The regulation mechanism demonstrated that Lp_2642 can bind to three sites of promoter, which enhances its transcription and expression, thereby increasing plantaricin EF production. Amino acids Asn-100, Asn-64, and Thr-69 may play a key role in the binding of Lp_2642. These results provide a novel strategy for mass production of plantaricin EF, which facilitates its large-scale production and application in the agriculture and food industries as a preservative.

摘要

提供了163株的全基因组和转录组序列。163株中有一条环状染色体和四个环状质粒,大小分别为3,131,367;56,674;49,140;43,628和36,387碱基对。从基因组数据中选择了调节因子Lp_2642,其过表达增加了植物乳杆菌素EF生物合成中相关基因的转录水平,并提高了植物乳杆菌素EF的产量。在163(Lp_2642)中其产量为17.30mg/L,比原始菌株高1.29倍。调节机制表明,Lp_2642可以与启动子的三个位点结合,增强其转录和表达,从而提高植物乳杆菌素EF的产量。氨基酸Asn-100、Asn-64和Thr-69可能在Lp_2642的结合中起关键作用。这些结果为植物乳杆菌素EF的大规模生产提供了一种新策略,有助于其作为防腐剂在农业和食品工业中的大规模生产和应用。

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