Section of Biological Chemistry, Department of Neurosciences, Biomedicine and Movement Sciences, University of Verona, 37134 Verona, Italy.
Division of Biochemistry, Department of Neuroscience, University of Oldenburg, 26111 Oldenburg, Germany.
Int J Mol Sci. 2022 Mar 17;23(6):3240. doi: 10.3390/ijms23063240.
The cone-specific guanylate cyclase-activating protein 3 (GCAP3), encoded by the GUCA1C gene, has been shown to regulate the enzymatic activity of membrane-bound guanylate cyclases (GCs) in bovine and teleost fish photoreceptors, to an extent comparable to that of the paralog protein GCAP1. To date, the molecular mechanisms underlying GCAP3 function remain largely unexplored. In this work, we report a thorough characterization of the biochemical and biophysical properties of human GCAP3, moreover, we identified an isolated case of retinitis pigmentosa, in which a patient carried the c.301G>C mutation in GUCA1C, resulting in the substitution of a highly conserved aspartate residue by a histidine (p.(D101H)). We found that myristoylated GCAP3 can activate GC1 with a similar Ca2+-dependent profile, but significantly less efficiently than GCAP1. The non-myristoylated form did not induce appreciable regulation of GC1, nor did the p.D101H variant. GCAP3 forms dimers under physiological conditions, but at odds with its paralogs, it tends to form temperature-dependent aggregates driven by hydrophobic interactions. The peculiar properties of GCAP3 were confirmed by 2 ms molecular dynamics simulations, which for the p.D101H variant highlighted a very high structural flexibility and a clear tendency to lose the binding of a Ca2+ ion to EF3. Overall, our data show that GCAP3 has unusual biochemical properties, which make the protein significantly different from GCAP1 and GCAP2. Moreover, the newly identified point mutation resulting in a substantially unfunctional protein could trigger retinitis pigmentosa through a currently unknown mechanism.
锥细胞特异性鸟苷酸环化酶激活蛋白 3(GCAP3),由 GUCA1C 基因编码,已被证明可调节牛和硬骨鱼光感受器中膜结合鸟苷酸环化酶(GCs)的酶活性,其程度可与蛋白 GCAP1 的程度相媲美。迄今为止,GCAP3 功能的分子机制在很大程度上仍未得到探索。在这项工作中,我们全面表征了人 GCAP3 的生化和生物物理特性,此外,我们还鉴定了一例视网膜色素变性患者,该患者在 GUCA1C 中携带 c.301G>C 突变,导致高度保守的天冬氨酸残基被组氨酸取代(p.(D101H))。我们发现,豆蔻酰化的 GCAP3 可以以类似于 Ca2+依赖性的方式激活 GC1,但效率明显低于 GCAP1。非豆蔻酰化形式不会引起 GC1 的明显调节,p.D101H 变体也不会。GCAP3 在生理条件下形成二聚体,但与它的同源蛋白不同,它倾向于形成由疏水相互作用驱动的温度依赖性聚集体。GCAP3 的特殊性质通过 2 ms 分子动力学模拟得到了证实,对于 p.D101H 变体,它突出了非常高的结构灵活性和明显失去与 EF3 结合 Ca2+离子的倾向。总体而言,我们的数据表明 GCAP3 具有不寻常的生化特性,这使得该蛋白与 GCAP1 和 GCAP2 显著不同。此外,新发现的导致蛋白质基本无功能的点突变可能通过目前未知的机制引发视网膜色素变性。