Enteric Virus Laboratory, Department of Genetics, Microbiology and Statistics, University of Barcelona, 08028 Barcelona, Spain.
Nutrition and Food Safety Research Institute (INSA·UB), University of Barcelona, 08921 Santa Coloma de Gramenet, Spain.
Viruses. 2022 Feb 27;14(3):488. doi: 10.3390/v14030488.
Molecular characterization of human norovirus (HuNoV) genotypes enhances the understanding of viral features and illustrates distinctive evolutionary patterns. The aim of our study was to describe the prevalence of the genetic diversity and the epidemiology of the genotypes involved in HuNoV outbreaks in Catalonia (Spain) between 2017 and 2019. A total of 100 HuNoV outbreaks were notified with the predominance of GII (70%), followed by GI (27%) and mixed GI/GII (3%). Seasonality was observed for GII outbreaks only. The most prevalent genotypes identified were GII.4[P31] Sydney 2012, GII.4[P16] Sydney 2012 and GII.2[P16]. As compared to person-to-person (P/P) transmitted outbreaks, foodborne outbreaks showed significantly higher attack rates and lower duration. The average attack rate was higher in youth hostel/campgrounds compared to nursing homes. Only genotypes GI.4[P4], GII.2[P16], GII.4[P16], GII.4[P31] and GII.17[P17] were consistently detected every year, and only abundance of GII.2[P16] showed a negative trend over time. GII.4 Sydney 2012 outbreaks were significantly associated to nursing homes, while GII.2[P16] and GI.3[P3] were most frequently identified in youth hostel/campgrounds. The average attack rate was significantly higher when comparing GII.2[P16] vs. GI.4[P4], GII.2[P16] vs. GII.4[P31] Sydney 2012, and GII.6[P7] vs. GII.4[P31] Sydney 2012. No correlations were found between genotype and outbreak duration or age of affected individuals.
人类诺如病毒(HuNoV)基因型的分子特征增强了对病毒特征的理解,并说明了独特的进化模式。我们的研究目的是描述 2017 年至 2019 年期间在加泰罗尼亚(西班牙)发生的 HuNoV 暴发中遗传多样性和基因型的流行病学情况。共报告了 100 起 HuNoV 暴发,以 GII 为主(70%),其次是 GI(27%)和混合 GI/GII(3%)。仅观察到 GII 暴发的季节性。鉴定出的最常见基因型是 GII.4[P31]悉尼 2012、GII.4[P16]悉尼 2012 和 GII.2[P16]。与人际传播(P/P)暴发相比,食源性暴发的攻击率明显较高,持续时间较短。青年旅社/营地的平均攻击率高于养老院。每年都一致检测到基因型 GI.4[P4]、GII.2[P16]、GII.4[P16]、GII.4[P31]和 GII.17[P17],只有 GII.2[P16]的丰度随时间呈负趋势。GII.4 悉尼 2012 暴发与养老院显著相关,而 GII.2[P16]和 GI.3[P3]最常发生在青年旅社/营地。与 GI.4[P4]相比,GII.2[P16]的平均攻击率显著较高,与 GII.2[P16]相比,GII.4[P31]悉尼 2012 的平均攻击率显著较高,与 GII.6[P7]相比,GII.4[P31]悉尼 2012 的平均攻击率显著较高。未发现基因型与暴发持续时间或受影响个体年龄之间存在相关性。