Department of Entomology, Texas A&M University, College Station, TX, USA.
Pest Manag Sci. 2022 Aug;78(8):3215-3225. doi: 10.1002/ps.6884. Epub 2022 Apr 12.
RNA interference (RNAi) selectively targets genes and silences their expression in vivo, causing developmental defects, mortality and altered behavior. Consequently, RNAi has emerged as a promising research area for insect pest management. However, it is not yet a viable alternative over conventional pesticides despite several theoretical advantages in safety and specificity. As a first step toward a more standardized approach, a machine learning algorithm was used to identify factors that predict trial efficacy. Current research on RNAi for pest management is highly variable and relatively unstandardized. The applied random forest model was able to reliably predict mortality ranges based on bioassay parameters with 72.6% accuracy. Response time and target gene were the most important variables in the model, followed by applied dose, double-stranded RNA (dsRNA) construct size and target species, further supported by generalized linear mixed effect modeling. Our results identified informative trends, supporting the idea that basic principles of toxicology apply to RNAi bioassays and provide initial guidelines standardizing future research similar to studies of traditional insecticides. We advocate for training that integrates genetic, organismal, and toxicological approaches to accelerate the development of RNAi as an effective tool for pest management. © 2022 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
RNA 干扰 (RNAi) 能够在体内选择性地靶向基因并使其沉默,导致发育缺陷、死亡和行为改变。因此,RNAi 已成为害虫管理领域很有前途的研究领域。然而,尽管在安全性和特异性方面具有若干理论优势,但它还不是一种可行的传统农药替代品。作为更标准化方法的第一步,使用机器学习算法来识别预测试验功效的因素。目前针对害虫管理的 RNAi 研究高度可变且相对缺乏标准化。应用随机森林模型能够基于生物测定参数可靠地预测死亡率范围,准确率为 72.6%。反应时间和靶基因是模型中最重要的变量,其次是应用剂量、双链 RNA(dsRNA) 构建体大小和靶标物种,这进一步得到了广义线性混合效应模型的支持。我们的结果确定了信息丰富的趋势,支持这样一种观点,即毒理学的基本原理适用于 RNAi 生物测定,并为标准化未来研究提供了初步指导,类似于传统杀虫剂的研究。我们提倡整合遗传、机体和毒理学方法的培训,以加速 RNAi 作为害虫管理有效工具的发展。© 2022 作者。Pest Management Science 由 John Wiley & Sons Ltd 代表化学工业协会出版。