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在圈养小熊猫中,腺相关细小病毒感染普遍存在、持续存在且具有遗传多样性。

AMDOPARVOVIRUS INFECTIONS ARE PREVALENT, PERSISTENT, AND GENETICALLY DIVERSE IN ZOO-HOUSED RED PANDAS ().

作者信息

Alex Charles E, Kubiski Steven V, Jackson Kenneth A, Wack Raymund F, Pesavento Patricia A

机构信息

University of California, Davis (UC Davis) School of Veterinary Medicine, Department of Pathology, Microbiology, and Immunology, Davis, CA 95616, USA.

San Diego Zoo Wildlife Alliance, San Diego, CA 92112, USA.

出版信息

J Zoo Wildl Med. 2022 Mar;53(1):83-91. doi: 10.1638/2021-0082.

Abstract

Red pandas () are a globally endangered small carnivoran species and subjects of a robust ex situ conservation effort that includes animals housed in zoos. In 2018, red panda amdoparvovirus (RPAV) was discovered by metagenomics analyses of tissues from two geriatric red pandas, and in one case it was associated with significant lesions. Because RPAV was discovered in a single zoo cohort, it was unclear whether these infections represented a widely distributed, enzootic virus of red pandas or a localized 'spillover' from a different host species into this collection. The first goal of this study was to estimate the prevalence of RPAV in US zoos. The authors amplified RPAV from feces of 104 individual red pandas from 37 US zoos, and the virus was detected in 52/104 samples (50.0%). Next, to establish persistence of infection in individual animals, the authors tested serial samples in a single cohort over a 4.5-yr period, and virus was consistently shed by infected animals throughout the sampling period. Finally, full viral coding sequences were amplified and sequenced from three cases, and partial sequences of both the nonstructural and capsid genes were obtained for an additional 19 cases. RPAV is a genetically diverse but monophyletic viral species, and multiple viral lineages are present in US zoo-housed red pandas. The authors do not know how red pandas were originally infected, but RPAV is very common in red pandas in the United States, and infections are persistent-presumably for the lifetime of the animal.

摘要

小熊猫是一种全球濒危的小型食肉动物,是包括动物园饲养动物在内的强大迁地保护工作的对象。2018年,通过对两只老年小熊猫的组织进行宏基因组学分析发现了小熊猫amdo细小病毒(RPAV),在其中一个案例中,它与严重病变有关。由于RPAV是在一个动物园群体中发现的,因此不清楚这些感染是代表小熊猫广泛分布的地方性病毒,还是从不同宿主物种向这个群体的局部“溢出”。本研究的首要目标是估计美国动物园中RPAV的流行率。作者从美国37家动物园的104只个体小熊猫的粪便中扩增出RPAV,在52/104个样本(50.0%)中检测到该病毒。接下来,为了确定个体动物感染的持续性,作者在4.5年的时间里对一个单一群体的系列样本进行了检测,在整个采样期间,受感染动物持续排出病毒。最后,从三个案例中扩增并测序了完整的病毒编码序列,并从另外19个案例中获得了非结构基因和衣壳基因的部分序列。RPAV是一种基因多样但单系的病毒物种,在美国动物园饲养的小熊猫中存在多个病毒谱系。作者不知道小熊猫最初是如何感染的,但RPAV在美国的小熊猫中非常常见,感染是持续性的——大概在动物的一生中都是如此。

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