Departamento de Genética, Microbiología y Estadística, Universidad de Barcelona.
Human Health Therapeutics Research Centre, National Research Council Canada; Department of Chemistry, Carleton University.
J Vis Exp. 2022 Mar 11(181). doi: 10.3791/63231.
The study of glycosylation in prokaryotes is a rapidly growing area. Bacteria harbor different glycosylated structures on their surface whose glycans constitute a strain-specific barcode. The associated glycans show higher diversity in sugar composition and structure than those of eukaryotes and are important in bacterial-host recognition processes and interaction with the environment. In pathogenic bacteria, glycoproteins have been involved in different stages of the infectious process, and glycan modifications can interfere with specific functions of glycoproteins. However, despite the advances made in the understanding of glycan composition, structure, and biosynthesis pathways, understanding of the role of glycoproteins in pathogenicity or interaction with the environment remains very limited. Furthermore, in some bacteria, the enzymes required for protein glycosylation are shared with other polysaccharide biosynthetic pathways, such as lipopolysaccharide and capsule biosynthetic pathways. The functional importance of glycosylation has been elucidated in several bacteria through mutation of specific genes thought to be involved in the glycosylation process and the study of its impact on the expression of the target glycoprotein and the modifying glycan. Mesophilic Aeromonas have a single and O-glycosylated polar flagellum. Flagellar glycans show diversity in carbohydrate composition and chain length between Aeromonas strains. However, all strains analyzed to date show a pseudaminic acid derivative as the linking sugar that modifies serine or threonine residues. The pseudaminic acid derivative is required for polar flagella assembly, and its loss has an impact on adhesion, biofilm formation, and colonization. The protocol detailed in this article describes how the construction of null mutants can be used to understand the involvement of genes or genome regions containing putative glycosyltransferases in the biosynthesis of a flagellar glycan. This includes the potential to understand the function of the glycosyltransferases involved and the role of the glycan. This will be achieved by comparing the glycan deficient mutant to the wild-type strain.
原核生物糖基化的研究是一个快速发展的领域。细菌在其表面携带不同的糖基化结构,其聚糖构成菌株特异性的条码。相关的聚糖在糖组成和结构上比真核生物具有更高的多样性,并且在细菌-宿主识别过程和与环境的相互作用中很重要。在致病性细菌中,糖蛋白参与了感染过程的不同阶段,糖基化修饰可以干扰糖蛋白的特定功能。然而,尽管在糖基化组成、结构和生物合成途径的理解方面取得了进展,但对糖蛋白在致病性或与环境相互作用中的作用的理解仍然非常有限。此外,在一些细菌中,用于蛋白质糖基化的酶与其他多糖生物合成途径(如脂多糖和荚膜生物合成途径)共享。通过突变被认为参与糖基化过程的特定基因,并研究其对靶糖蛋白表达和修饰聚糖的影响,已经在几种细菌中阐明了糖基化的功能重要性。嗜温气单胞菌有一个单一的 O-糖基化极性鞭毛。鞭毛聚糖在气单胞菌菌株之间表现出碳水化合物组成和链长的多样性。然而,迄今为止分析的所有菌株都显示出假氨基糖衍生物作为连接糖,修饰丝氨酸或苏氨酸残基。假氨基糖衍生物是极性鞭毛组装所必需的,其缺失会影响粘附、生物膜形成和定植。本文详述的方案描述了如何构建缺失突变体,以了解包含假定糖基转移酶的基因或基因组区域在鞭毛聚糖生物合成中的参与。这包括理解所涉及的糖基转移酶的功能和聚糖的作用的潜力。这将通过比较糖缺乏突变体和野生型菌株来实现。