Daoui Ossama, Mazoir Noureddine, Bakhouch Mohamed, Salah Mohammed, Benharref Ahmed, Gonzalez-Coloma Azucena, Elkhattabi Souad, Yazidi Mohamed El, Chtita Samir
Laboratory of Engineering, Systems and Applications, National School of Applied Sciences, Sidi Mohamed Ben Abdellah-Fez University, BP Box 72, Fez, Morocco.
Research Unit: Natural Resource Valorizations, Laboratory of Plant Biotechnology and Ecosystem Valorization, Faculty of Sciences, Chouaib Doukkali University, P.O. Box 20, El Jadida, Morocco.
Struct Chem. 2022;33(4):1063-1084. doi: 10.1007/s11224-022-01912-4. Epub 2022 Mar 23.
In the present work, 27 triterpene derivatives have been subjected to 3D-QSAR, ADME-Tox, and molecular docking for their insecticidal activity. The selected derivatives are previously semi-synthesized based on compounds obtained from and latex. The in silico studies were used to predict and to evaluate the antibacterial and insecticidal properties of the 3D structure of triterpene derivatives. The 3D-QSAR models are developed using CoMFA and CoMSIA techniques, and they have showed excellent statistical results ( = 0.99; = 0.672; = 0.91 for CoMFA and = 0.97; Q = 0.61; = 0.94 for CoMSIA). The results indicate that the built models are able to describe the relationship between the structure of triterpene derivatives and the pLD bioactivity. Based on contour maps obtained from CoMFA and CoMSIA models, 38 new molecules are designed and their pLD activities are predicted. The drug-like and ADME-Tox properties of the molecule designed are examined and led to the selection of four molecules (, , , as promising antibacterial and insecticidal agents. Compounds , , , and are able to inhibit the MurE (PDB code: 1E8C) and EcR (PDB code: 1R20) proteins involved in the process of antibacterial and insecticidal activities. This hypothesis is confirmed by the implementation of a molecular docking test. This test predicted the most important referential interactions that occur between the structure of triterpene derivatives and the targeted receptors. Among the four docked molecules, three molecules (, , and showed greater stability than the reference molecule inside the MurE and EcR receptors pocket. Therefore, the structure of the three new triterpene derivatives can be adopted as reference for the synthesis of antibacterial drugs and also in the development of insecticides.
在本研究中,对27种三萜衍生物进行了三维定量构效关系(3D-QSAR)、药物代谢动力学-毒理学(ADME-Tox)和分子对接研究,以评估它们的杀虫活性。所选衍生物先前是基于从[具体来源1]和[具体来源2]乳胶中获得的化合物进行半合成的。计算机模拟研究用于预测和评估三萜衍生物三维结构的抗菌和杀虫特性。使用比较分子场分析(CoMFA)和比较分子相似性指数分析(CoMSIA)技术建立了3D-QSAR模型,它们显示出优异的统计结果(CoMFA的R² = 0.99;q² = 0.672;s = 0.91,CoMSIA的R² = 0.97;Q = 0.61;s = 0.94)。结果表明,所建立的模型能够描述三萜衍生物结构与pLD生物活性之间的关系。基于从CoMFA和CoMSIA模型获得的等高线图,设计了38个新分子并预测了它们的pLD活性。对设计的分子的类药性质和ADME-Tox特性进行了研究,结果选出了四个分子([分子1名称]、[分子2名称]、[分子3名称]、[分子4名称])作为有前景的抗菌和杀虫试剂。化合物[分子1名称]、[分子2名称]、[分子3名称]和[分子4名称]能够抑制参与抗菌和杀虫活性过程的MurE(蛋白质数据银行代码:1E8C)和蜕皮激素受体(EcR,蛋白质数据银行代码:1R20)蛋白。分子对接试验证实了这一假设。该试验预测了三萜衍生物结构与靶向受体之间发生的最重要的参考相互作用。在对接的四个分子中,三个分子([分子1名称]、[分子2名称]和[分子3名称])在MurE和EcR受体口袋内显示出比参考分子[参考分子名称]更高的稳定性。因此,这三种新的三萜衍生物的结构可作为合成抗菌药物以及开发杀虫剂的参考。