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全基因组关联分析揭示了影响鸭喙皮黑色素斑点积累的遗传原因。

Genome-wide association analysis reveal the genetic reasons affect melanin spot accumulation in beak skin of ducks.

机构信息

State Key Laboratory of Animal Nutrition; Key Laboratory of Animal (Poultry) Genetics Breeding and Reproduction, Ministry of Agriculture and Rural Affairs, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.

Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, 613000, China.

出版信息

BMC Genomics. 2022 Mar 26;23(1):236. doi: 10.1186/s12864-022-08444-5.

DOI:10.1186/s12864-022-08444-5
PMID:35346029
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8962612/
Abstract

BACKGROUND

Skin pigmentation is a broadly appearing phenomenon of most animals and humans in nature. Here we used a bird model to investigate why melanin spot deposits on the skin.

RESULTS

Our result showed that growth age and the sunlight might induce melanin deposition in bird beak skin which was determined by genetic factors. GWAS helped us to identify two major loci affecting melanin deposition, located on chromosomes 13 and 25, respectively. The fine mapping works narrowed the candidate regions to 0.98 Mb and 1.0 Mb on chromosomes 13 and 25. The MITF and POU2F3 may be the causative genes and synergistically affect melanin deposition during duck beak skin. Furthermore, our data strongly demonstrated that the pathway of melanin metabolism contributes to melanin deposition on the skin.

CONCLUSIONS

We demonstrated that age and sunlight induce melanin deposition in bird beak skin, while heredity is fundamental. The MITF and POU2F3 likely played a synergistic effect on the regulation of melanin synthesis, and their mutations contribute to phenotypic differences in beak melanin deposition among individuals. It is pointed out that melanin deposition in the skin is related to the pathway of melanin metabolism, which provided insights into the molecular regulatory mechanisms and the genetic improvement of the melanin deposition in duck beak.

摘要

背景

皮肤色素沉着是自然界中大多数动物和人类普遍存在的现象。在这里,我们使用鸟类模型来研究为什么黑色素会沉积在鸟喙的皮肤上。

结果

我们的结果表明,生长年龄和阳光可能会导致鸟喙皮肤中的黑色素沉积,这是由遗传因素决定的。全基因组关联分析(GWAS)帮助我们确定了两个主要的影响黑色素沉积的基因座,分别位于 13 号和 25 号染色体上。精细定位工作将候选区域缩小到 13 号和 25 号染色体上的 0.98Mb 和 1.0Mb。MITF 和 POU2F3 可能是导致黑色素沉积的候选基因,并在鸭喙皮肤黑色素沉积过程中协同作用。此外,我们的数据有力地证明了黑色素代谢途径有助于皮肤黑色素的沉积。

结论

我们证明了年龄和阳光会诱导鸟类喙部皮肤中的黑色素沉积,而遗传是基础。MITF 和 POU2F3 可能在黑色素合成的调控中发挥协同作用,它们的突变导致了喙部黑色素沉积的个体间表型差异。值得指出的是,皮肤中的黑色素沉积与黑色素代谢途径有关,这为黑色素沉积的分子调控机制和鸭喙黑色素沉积的遗传改良提供了新的思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/6249dbb67d5f/12864_2022_8444_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/e43939a71b59/12864_2022_8444_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/13ec613596b9/12864_2022_8444_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/380b37b9b2ff/12864_2022_8444_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/e0995437ff59/12864_2022_8444_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/6249dbb67d5f/12864_2022_8444_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/e43939a71b59/12864_2022_8444_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/13ec613596b9/12864_2022_8444_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/380b37b9b2ff/12864_2022_8444_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/e0995437ff59/12864_2022_8444_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8730/8962612/6249dbb67d5f/12864_2022_8444_Fig5_HTML.jpg

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本文引用的文献

1
Reporting animal research: Explanation and elaboration for the ARRIVE guidelines 2.0.报告动物研究:ARRIVE 指南 2.0 的解释和说明。
PLoS Biol. 2020 Jul 14;18(7):e3000411. doi: 10.1371/journal.pbio.3000411. eCollection 2020 Jul.
2
Synthesis and physiological implications of melanic pigments.黑色素的合成及其生理意义。
Oncol Lett. 2019 May;17(5):4183-4187. doi: 10.3892/ol.2019.10071. Epub 2019 Feb 25.
3
An intercross population study reveals genes associated with body size and plumage color in ducks.杂交群体研究揭示了与鸭体尺和羽毛颜色相关的基因。
Genes (Basel). 2022 Jul 18;13(7):1271. doi: 10.3390/genes13071271.
4
Genome-Wide Analysis Identifies Candidate Genes Encoding Feather Color in Ducks.全基因组分析鉴定出编码鸭羽毛颜色的候选基因。
Genes (Basel). 2022 Jul 14;13(7):1249. doi: 10.3390/genes13071249.
Nat Commun. 2018 Jul 17;9(1):2648. doi: 10.1038/s41467-018-04868-4.
4
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.系统发育树的置信区间:一种使用自展法的方法。
Evolution. 1985 Jul;39(4):783-791. doi: 10.1111/j.1558-5646.1985.tb00420.x.
5
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
6
Natural and sun-induced aging of human skin.人类皮肤的自然老化和光老化。
Cold Spring Harb Perspect Med. 2015 Jan 5;5(1):a015370. doi: 10.1101/cshperspect.a015370.
7
POU transcription factors in melanocytes and melanoma.POU 转录因子在黑素细胞和黑色素瘤中的作用。
Eur J Cell Biol. 2014 Jan-Feb;93(1-2):55-60. doi: 10.1016/j.ejcb.2013.10.001. Epub 2013 Oct 26.
8
PDZK1 upregulation in estrogen-related hyperpigmentation in melasma.PDZK1 在黄褐斑中与雌激素相关的色素沉着过度中的上调。
J Invest Dermatol. 2012 Nov;132(11):2622-31. doi: 10.1038/jid.2012.175. Epub 2012 Jun 14.
9
Shining light on skin pigmentation: the darker and the brighter side of effects of UV radiation.揭示皮肤色素沉着的奥秘:紫外线辐射影响的明暗两面。
Photochem Photobiol. 2012 Sep-Oct;88(5):1075-82. doi: 10.1111/j.1751-1097.2012.01138.x. Epub 2012 Apr 12.
10
NGS QC Toolkit: a toolkit for quality control of next generation sequencing data.NGS QC 工具包:下一代测序数据质量控制工具包。
PLoS One. 2012;7(2):e30619. doi: 10.1371/journal.pone.0030619. Epub 2012 Feb 1.