Zhao Yidi, Song Qingya, Xu Fangshi, Zhou Yang, Zuo Xiaoli, Zhang Zhengliang
Department of Emergency, Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Xi'an Medical Emergency Center, Xi'an, China.
Front Genet. 2022 Mar 9;13:823443. doi: 10.3389/fgene.2022.823443. eCollection 2022.
Hepatocellular carcinoma (HCC) is a common abdominal cancer. The existing therapeutic approaches often fail to achieve satisfactory results. Pyroptosis, an inflammatory form of programmed cell death, provides new ideas for anticancer treatment. However, the roles of pyroptosis-related (PR) genes (PRGs) in HCC remain elusive. Differentially expressed genes (DEGs) (n = 22) were screened out using TCGA and GTEx databases. A novel PR risk signature was constructed through Lasso regression analysis. Its prognostic value was evaluated through a series of survival analyses and was tested in ICGC and GSE14520 cohorts. CIBERSORT, ssGSEA, and ESTIMATE methods were employed to determine the effects of the PR risk score on the tumor immune microenvironment (TIM). The TIDE scoring system, IMvigor210 cohort, GSE109211 dataset, and GSDC database were applied to explore the associations of the PR risk score with therapeutic effects. The biofunctions of WNK1 in hepatocellular cancer (HC) cells were confirmed through qPCR, colony formation, and Transwell assays. Overall, 22 of 45 PRGs (48.9%) were abnormally expressed in HCC samples. Then, a PR risk signature consisting of eight PRGs was constructed. A high PR risk score led to an unfavorable prognosis. The PR risk score was identified as an independent prognostic factor of HCC and could increase the decision-making benefit of the traditional TNM model. In addition, we established a nomogram containing the clinical stage and PR risk score to predict the survival rates of HCC patients. The prognostic value of the PR model was successfully validated in ICGC and GSE14520 cohorts. Moreover, high PR risk conferred the decreased infiltration level of CD8 T cells and weakened the activities of "cytolytic activity" pathways. As for therapeutic correlation, a high PR risk score seemed to imply a poor efficacy of PD-1/L1 inhibitors and sorafenib. Finally, the overexpression of WNK1 could promote the proliferation, migration, and invasion of HC cells. The PR risk score was closely related to the prognosis, antitumor immune process, therapeutic outcomes, and malignant progression of HCC. WNK1, the core regulator of pyroptosis, possesses pro-oncogenic abilities, showing promise as a novel treatment target.
肝细胞癌(HCC)是一种常见的腹部癌症。现有的治疗方法往往无法取得令人满意的效果。细胞焦亡是一种程序性细胞死亡的炎症形式,为抗癌治疗提供了新思路。然而,细胞焦亡相关(PR)基因(PRGs)在HCC中的作用仍不清楚。利用TCGA和GTEx数据库筛选出差异表达基因(DEGs)(n = 22)。通过Lasso回归分析构建了一种新的PR风险特征。通过一系列生存分析评估其预后价值,并在ICGC和GSE14520队列中进行验证。采用CIBERSORT、ssGSEA和ESTIMATE方法确定PR风险评分对肿瘤免疫微环境(TIM)的影响。应用TIDE评分系统、IMvigor210队列、GSE109211数据集和GSDC数据库探讨PR风险评分与治疗效果的相关性。通过qPCR、集落形成和Transwell实验证实了WNK1在肝癌(HC)细胞中的生物学功能。总体而言,45个PRGs中有22个(48.9%)在HCC样本中异常表达。然后,构建了一个由8个PRGs组成的PR风险特征。高PR风险评分导致预后不良。PR风险评分被确定为HCC的独立预后因素,可提高传统TNM模型的决策效益。此外,我们建立了一个包含临床分期和PR风险评分的列线图,以预测HCC患者的生存率。PR模型的预后价值在ICGC和GSE14520队列中得到成功验证。此外,高PR风险导致CD8 T细胞浸润水平降低,“细胞溶解活性”途径的活性减弱。至于治疗相关性,高PR风险评分似乎意味着PD-1/L1抑制剂和索拉非尼的疗效较差。最后,WNK1的过表达可促进HC细胞的增殖、迁移和侵袭。PR风险评分与HCC的预后、抗肿瘤免疫过程、治疗结果和恶性进展密切相关。WNK1作为细胞焦亡的核心调节因子,具有促癌能力,有望成为一种新的治疗靶点。