Selikhanov Georgii, Fufina Tatiana, Guenther Sebastian, Meents Alke, Gabdulkhakov Azat, Vasilieva Lyudmila
Group of Structural Studies of Macromolecular Complexes, Institute of Protein Research, Russian Academy of Sciences, Institutskaya 4, Pushchino 142290, Moscow Region, Russian Federation.
Federal Research Center Pushchino Scientific Center for Biological Research PSCBR, Institute of Basic Biological Problems, Russian Academy of Sciences, Institutskaya 2, Pushchino 142290, Moscow Region, Russian Federation.
IUCrJ. 2022 Feb 1;9(Pt 2):261-271. doi: 10.1107/S2052252521013178. eCollection 2022 Mar 1.
The first steps of the global process of photosynthesis take place in specialized membrane pigment-protein complexes called photosynthetic reaction centers (RCs). The RC of the photosynthetic purple bacterium , a relatively simple analog of the more complexly organized photosystem II in plants, algae and cyanobacteria, serves as a convenient model for studying pigment-protein interactions that affect photochemical processes. In bacterial RCs the bacteriochlorophyll (BChl) dimer P serves as the primary electron donor, and its redox potential is a critical factor in the efficient functioning of the RC. It has previously been shown that the replacement of Phe M197 by His strongly affects the oxidation potential of P ( P/P), increasing its value by 125 mV, as well as increasing the thermal stability of RC and its stability in response to external pressure. The crystal structures of F(M197)H RC at high resolution obtained using various techniques presented in this report clarify the optical and electrochemical properties of the primary electron donor and the increased resistance of the mutant complex to denaturation. The electron-density maps are consistent with the donation of a hydrogen bond from the imidazole group of His M197 to the C2-acetyl carbonyl group of BChl P. The formation of this hydrogen bond leads to a considerable out-of-plane rotation of the acetyl carbonyl group and results in a 1.2 Å shift of the O atom of this group relative to the wild-type structure. Besides, the distance between BChl P and P in the area of pyrrole ring I was found to be increased by up to 0.17 Å. These structural changes are discussed in association with the spectral properties of BChl dimer P. The electron-density maps strongly suggest that the imidazole group of His M197 accepts another hydrogen bond from the nearest water molecule, which in turn appears to form two more hydrogen bonds to Asn M195 and Asp L155. As a result of the F(M197)H mutation, BChl P finds itself connected to the extensive hydrogen-bonding network that pre-existed in wild-type RC. Dissimilarities in the two hydrogen-bonding networks near the M197 and L168 sites may account for the different changes of the P/P in F(M197)H and H(L168)F RCs. The involvement of His M197 in the hydrogen-bonding network also appears to be related to stabilization of the F(M197)H RC structure. Analysis of the experimental data presented here and of the data available in the literature points to the fact that the hydrogen-bonding networks in the vicinity of BChl dimer P may play an important role in fine-tuning the redox properties of the primary electron donor.
光合作用全球过程的最初步骤发生在被称为光合反应中心(RCs)的特殊膜色素 - 蛋白质复合物中。光合紫色细菌的反应中心是植物、藻类和蓝细菌中组织更为复杂的光系统II的相对简单的类似物,它是研究影响光化学过程的色素 - 蛋白质相互作用的便利模型。在细菌反应中心中,细菌叶绿素(BChl)二聚体P作为初级电子供体,其氧化还原电位是反应中心有效运作的关键因素。先前已经表明,用组氨酸取代苯丙氨酸M197会强烈影响P(P/P)的氧化电位,使其值增加125 mV,同时还会提高反应中心的热稳定性及其对外界压力的稳定性。本报告中使用各种技术获得的高分辨率F(M197)H反应中心晶体结构阐明了初级电子供体的光学和电化学性质以及突变复合物对变性的增强抗性。电子密度图与组氨酸M197的咪唑基团向BChl P的C2 - 乙酰羰基提供氢键一致。这种氢键的形成导致乙酰羰基发生相当大的平面外旋转,并使该基团的O原子相对于野生型结构发生1.2 Å的位移。此外,在吡咯环I区域中BChl P和P之间的距离增加了多达0.17 Å。这些结构变化与BChl二聚体P的光谱性质相关进行了讨论。电子密度图强烈表明,组氨酸M197的咪唑基团接受来自最近水分子的另一个氢键,而这个水分子反过来又似乎与天冬酰胺M195和天冬氨酸L155形成另外两个氢键。由于F(M197)H突变,BChl P发现自身连接到野生型反应中心中预先存在的广泛氢键网络。M197和L168位点附近两个氢键网络的差异可能解释了F(M197)H和H(L168)F反应中心中P/P的不同变化。组氨酸M197参与氢键网络似乎也与F(M197)H反应中心结构的稳定有关。对这里呈现的实验数据以及文献中现有数据的分析表明,BChl二聚体P附近的氢键网络可能在微调初级电子供体的氧化还原性质方面发挥重要作用。