• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

具有实时荧光细胞周期标记的 4D 肿瘤球体的随机数学模型。

A stochastic mathematical model of 4D tumour spheroids with real-time fluorescent cell cycle labelling.

机构信息

School of Mathematical Sciences, Queensland University of Technology (QUT), Brisbane, Australia.

School of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand.

出版信息

J R Soc Interface. 2022 Apr;19(189):20210903. doi: 10.1098/rsif.2021.0903. Epub 2022 Apr 6.

DOI:10.1098/rsif.2021.0903
PMID:35382573
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8984298/
Abstract

tumour spheroids have been used to study avascular tumour growth and drug design for over 50 years. Tumour spheroids exhibit heterogeneity within the growing population that is thought to be related to spatial and temporal differences in nutrient availability. The recent development of real-time fluorescent cell cycle imaging allows us to identify the position and cell cycle status of individual cells within the growing spheroid, giving rise to the notion of a four-dimensional (4D) tumour spheroid. We develop the first stochastic individual-based model (IBM) of a 4D tumour spheroid and show that IBM simulation data compares well with experimental data using a primary human melanoma cell line. The IBM provides quantitative information about nutrient availability within the spheroid, which is important because it is difficult to measure these data experimentally.

摘要

肿瘤球体已经被用于研究无血管肿瘤生长和药物设计超过 50 年。肿瘤球体在生长过程中表现出异质性,这被认为与营养物质可获得性的空间和时间差异有关。实时荧光细胞周期成像的最新发展使我们能够识别生长中的球体中单个细胞的位置和细胞周期状态,从而产生了四维(4D)肿瘤球体的概念。我们开发了第一个 4D 肿瘤球体的随机个体基础模型(IBM),并表明 IBM 模拟数据与使用原发性人类黑色素瘤细胞系的实验数据非常吻合。IBM 提供了关于球体内部营养物质可用性的定量信息,这很重要,因为这些数据很难通过实验进行测量。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/f00d9c9f87ed/rsif20210903f08.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/524f0849467f/rsif20210903f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/f9e90d6cc2da/rsif20210903f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/68595cd3a514/rsif20210903f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/705b71e6c9b0/rsif20210903f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/03bf51ac2cc9/rsif20210903f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/4be8068999d1/rsif20210903f06.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/47dd3e9f5c02/rsif20210903f07.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/f00d9c9f87ed/rsif20210903f08.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/524f0849467f/rsif20210903f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/f9e90d6cc2da/rsif20210903f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/68595cd3a514/rsif20210903f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/705b71e6c9b0/rsif20210903f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/03bf51ac2cc9/rsif20210903f05.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/4be8068999d1/rsif20210903f06.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/47dd3e9f5c02/rsif20210903f07.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6d56/8984298/f00d9c9f87ed/rsif20210903f08.jpg

相似文献

1
A stochastic mathematical model of 4D tumour spheroids with real-time fluorescent cell cycle labelling.具有实时荧光细胞周期标记的 4D 肿瘤球体的随机数学模型。
J R Soc Interface. 2022 Apr;19(189):20210903. doi: 10.1098/rsif.2021.0903. Epub 2022 Apr 6.
2
Mathematical Model of Tumour Spheroid Experiments with Real-Time Cell Cycle Imaging.具有实时细胞周期成像的肿瘤球体实验的数学模型
Bull Math Biol. 2021 Mar 20;83(5):44. doi: 10.1007/s11538-021-00878-4.
3
Quantitative analysis of tumour spheroid structure.肿瘤球体结构的定量分析。
Elife. 2021 Nov 29;10:e73020. doi: 10.7554/eLife.73020.
4
Designing and interpreting 4D tumour spheroid experiments.设计和解读 4D 肿瘤球体实验
Commun Biol. 2022 Jan 24;5(1):91. doi: 10.1038/s42003-022-03018-3.
5
Real-Time Cell Cycle Imaging in a 3D Cell Culture Model of Melanoma.黑色素瘤三维细胞培养模型中的实时细胞周期成像
Methods Mol Biol. 2017;1612:401-416. doi: 10.1007/978-1-4939-7021-6_29.
6
Real-Time Cell Cycle Imaging in a 3D Cell Culture Model of Melanoma, Quantitative Analysis, Optical Clearing, and Mathematical Modeling.实时细胞周期成像在黑色素瘤 3D 细胞培养模型中的应用:定量分析、光学透明化和数学建模。
Methods Mol Biol. 2024;2764:291-310. doi: 10.1007/978-1-0716-3674-9_19.
7
Imaging- and Flow Cytometry-based Analysis of Cell Position and the Cell Cycle in 3D Melanoma Spheroids.基于成像和流式细胞术的三维黑色素瘤球体中细胞位置和细胞周期分析
J Vis Exp. 2015 Dec 28(106):e53486. doi: 10.3791/53486.
8
Formation and Growth of Co-Culture Tumour Spheroids: New Compartment-Based Mathematical Models and Experiments.共培养肿瘤球的形成和生长:基于新隔室的数学模型与实验。
Bull Math Biol. 2023 Dec 13;86(1):8. doi: 10.1007/s11538-023-01229-1.
9
Microenvironmental regulation of proliferation in multicellular spheroids is mediated through differential expression of cyclin-dependent kinase inhibitors.多细胞球体中增殖的微环境调节是通过细胞周期蛋白依赖性激酶抑制剂的差异表达介导的。
Cancer Res. 2004 Mar 1;64(5):1621-31. doi: 10.1158/0008-5472.can-2902-2.
10
Mathematical modelling reveals cellular dynamics within tumour spheroids.数学建模揭示了肿瘤球体中的细胞动力学。
PLoS Comput Biol. 2020 Aug 18;16(8):e1007961. doi: 10.1371/journal.pcbi.1007961. eCollection 2020 Aug.

引用本文的文献

1
Non-destructive in situ monitoring of structural changes of 3D tumor spheroids during the formation, migration, and fusion process.在三维肿瘤球体的形成、迁移和融合过程中对其结构变化进行非破坏性原位监测。
Elife. 2025 Feb 12;13:RP101886. doi: 10.7554/eLife.101886.
2
An off-lattice discrete model to characterise filamentous yeast colony morphology.一种用于表征丝状酵母菌落形态的非晶格离散模型。
PLoS Comput Biol. 2024 Nov 21;20(11):e1012605. doi: 10.1371/journal.pcbi.1012605. eCollection 2024 Nov.
3
3D cell aggregates amplify diffusion signals.

本文引用的文献

1
A rigid body framework for multicellular modeling.用于多细胞建模的刚体框架。
Nat Comput Sci. 2021 Nov;1(11):754-766. doi: 10.1038/s43588-021-00154-4. Epub 2021 Nov 25.
2
Chaste: Cancer, Heart and Soft Tissue Environment.贞节:癌症、心脏与软组织环境。
J Open Source Softw. 2020 Mar 13;5(47):1848. doi: 10.21105/joss.01848.
3
Designing and interpreting 4D tumour spheroid experiments.设计和解读 4D 肿瘤球体实验
3D 细胞聚集体放大扩散信号。
PLoS One. 2024 Sep 12;19(9):e0310109. doi: 10.1371/journal.pone.0310109. eCollection 2024.
4
A comprehensive review of computational cell cycle models in guiding cancer treatment strategies.计算细胞周期模型在指导癌症治疗策略中的综合综述。
NPJ Syst Biol Appl. 2024 Jul 5;10(1):71. doi: 10.1038/s41540-024-00397-7.
5
Quantifying cell cycle regulation by tissue crowding.通过组织拥挤量化细胞周期调控。
Biophys J. 2025 Mar 18;124(6):923-932. doi: 10.1016/j.bpj.2024.05.003. Epub 2024 May 7.
6
Impact of Resistance on Therapeutic Design: A Moran Model of Cancer Growth.耐药性对治疗设计的影响:癌症生长的 Moran 模型。
Bull Math Biol. 2024 Mar 19;86(4):43. doi: 10.1007/s11538-024-01272-6.
7
Real-Time Cell Cycle Imaging in a 3D Cell Culture Model of Melanoma, Quantitative Analysis, Optical Clearing, and Mathematical Modeling.实时细胞周期成像在黑色素瘤 3D 细胞培养模型中的应用:定量分析、光学透明化和数学建模。
Methods Mol Biol. 2024;2764:291-310. doi: 10.1007/978-1-0716-3674-9_19.
8
Calibration of agent based models for monophasic and biphasic tumour growth using approximate Bayesian computation.基于近似贝叶斯计算的单相和双相肿瘤生长的基于代理的模型校准。
J Math Biol. 2024 Feb 15;88(3):28. doi: 10.1007/s00285-024-02045-4.
9
Quantification of spatial and phenotypic heterogeneity in an agent-based model of tumour-macrophage interactions.基于主体的肿瘤巨噬细胞相互作用模型中空间和表型异质性的定量分析。
PLoS Comput Biol. 2023 Mar 27;19(3):e1010994. doi: 10.1371/journal.pcbi.1010994. eCollection 2023 Mar.
10
Being Bayesian in the 2020s: opportunities and challenges in the practice of modern applied Bayesian statistics.21 世纪的贝叶斯主义者:现代应用贝叶斯统计学实践中的机遇与挑战。
Philos Trans A Math Phys Eng Sci. 2023 May 15;381(2247):20220156. doi: 10.1098/rsta.2022.0156. Epub 2023 Mar 27.
Commun Biol. 2022 Jan 24;5(1):91. doi: 10.1038/s42003-022-03018-3.
4
Quantitative analysis of tumour spheroid structure.肿瘤球体结构的定量分析。
Elife. 2021 Nov 29;10:e73020. doi: 10.7554/eLife.73020.
5
Multiparameter persistent homology landscapes identify immune cell spatial patterns in tumors.多参数持久同调景观鉴定肿瘤中的免疫细胞空间模式。
Proc Natl Acad Sci U S A. 2021 Oct 12;118(41). doi: 10.1073/pnas.2102166118.
6
Estimating parameters of a stochastic cell invasion model with fluorescent cell cycle labelling using approximate Bayesian computation.使用近似贝叶斯计算对带有荧光细胞周期标记的随机细胞入侵模型进行参数估计。
J R Soc Interface. 2021 Sep;18(182):20210362. doi: 10.1098/rsif.2021.0362. Epub 2021 Sep 22.
7
Mathematical Model of Tumour Spheroid Experiments with Real-Time Cell Cycle Imaging.具有实时细胞周期成像的肿瘤球体实验的数学模型
Bull Math Biol. 2021 Mar 20;83(5):44. doi: 10.1007/s11538-021-00878-4.
8
Mathematical modelling reveals cellular dynamics within tumour spheroids.数学建模揭示了肿瘤球体中的细胞动力学。
PLoS Comput Biol. 2020 Aug 18;16(8):e1007961. doi: 10.1371/journal.pcbi.1007961. eCollection 2020 Aug.
9
Practical parameter identifiability for spatio-temporal models of cell invasion.细胞入侵时空模型的实用参数可识别性。
J R Soc Interface. 2020 Mar;17(164):20200055. doi: 10.1098/rsif.2020.0055. Epub 2020 Mar 4.
10
Mathematical models incorporating a multi-stage cell cycle replicate normally-hidden inherent synchronization in cell proliferation.数学模型将细胞周期的多阶段纳入其中,复制了细胞增殖中正常隐藏的固有同步性。
J R Soc Interface. 2019 Aug 30;16(157):20190382. doi: 10.1098/rsif.2019.0382. Epub 2019 Aug 21.