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长链非编码RNA与GATA1及染色质重塑协同促进红系分化。

Long noncoding RNA promotes erythroid differentiation coordinating with GATA1 and chromatin remodeling.

作者信息

Zhu Junwei, Ren Yunxiao, Han Yuanyuan, Jin Tingting, Li Yanming, Ruan Xiuyan, Qu Hongzhu, Huang Shengwen, Zhang Zhaojun, Fang Xiangdong

机构信息

CAS Key Laboratory of Genome Science & Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China.

Institute for Stem Cell and Regeneration, Chinese Academy of Sciences, Beijing, China.

出版信息

Blood Sci. 2019 Oct 21;1(2):161-167. doi: 10.1097/BS9.0000000000000031. eCollection 2019 Oct.

DOI:10.1097/BS9.0000000000000031
PMID:35402806
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8975080/
Abstract

Erythropoiesis is a complex and sophisticated multi-stage process regulated by a variety of factors, including the transcription factor GATA1 and non-coding RNA. GATA1 is regarded as an essential transcriptional regulator promoting transcription of erythroid-specific genes-such as long non-coding RNAs (lncRNA). Here, we comprehensively screened lncRNAs that were potentially regulated by GATA1 in erythroid cells. We identified a novel lncRNA--and verified its role in promoting erythroid differentiation of K562 erythroid cells. We also predicted a model in which participates in erythroid differentiation via dynamic chromatin remodeling involving GATA1. The relationship between lncRNA and chromatin in the process of erythroid differentiation remains to be revealed, and in our study we have carried out preliminary explorations.

摘要

红细胞生成是一个复杂且精细的多阶段过程,受多种因素调控,包括转录因子GATA1和非编码RNA。GATA1被视为促进红系特异性基因(如长链非编码RNA,lncRNA)转录的关键转录调节因子。在此,我们全面筛选了红系细胞中可能受GATA1调控的lncRNA。我们鉴定出一种新型lncRNA,并验证了其在促进K562红系细胞红系分化中的作用。我们还预测了一个模型,其中lncRNA通过涉及GATA1的动态染色质重塑参与红系分化。lncRNA与染色质在红系分化过程中的关系仍有待揭示,在我们的研究中已进行了初步探索。

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引用本文的文献

1
Regulatory association of long noncoding RNAs and chromatin accessibility facilitates erythroid differentiation.长链非编码 RNA 和染色质可及性的调控关联促进红细胞分化。
Blood Adv. 2021 Dec 14;5(23):5396-5409. doi: 10.1182/bloodadvances.2021005167.
2
Screening of T Cell-Related Long Noncoding RNA-MicroRNA-mRNA Regulatory Networks in Non-Small-Cell Lung Cancer.非小细胞肺癌中 T 细胞相关长非编码 RNA-微小 RNA-mRNA 调控网络的筛选。
Biomed Res Int. 2020 Nov 14;2020:5816763. doi: 10.1155/2020/5816763. eCollection 2020.

本文引用的文献

1
Chromatin-associated RNAs as facilitators of functional genomic interactions.染色质相关 RNA 作为功能基因组相互作用的促进剂。
Nat Rev Genet. 2019 Sep;20(9):503-519. doi: 10.1038/s41576-019-0135-1.
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Identification and transcriptome analysis of erythroblastic island macrophages.红细胞生成小岛巨噬细胞的鉴定和转录组分析。
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Long non-coding PCED1B-AS1 regulates macrophage apoptosis and autophagy by sponging miR-155 in active tuberculosis.长链非编码 PCED1B-AS1 通过海绵吸附 miR-155 调控结核分枝杆菌感染中巨噬细胞凋亡和自噬
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A regulatory function of long non-coding RNAs in red blood cell development.长链非编码RNA在红细胞发育中的调控功能。
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